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BaseInfo

ncRNA ID novel_gma_miR3594
Species Glycine max
Class miRNA
Genome position Chr11:14895032-14895157 [+]
Reference genome Glycine_max_v2.0
Source SRR1451675
Length 21
Mature sequence(if miRNA) 1 - GAUUGAUUGUGUCCUCUUUGU - 21
Stem-loop(if miRNA) -GAU G  UG      -  -UU UG --      -------       -GU         -   C  AU
    U AU  UGUCCU CU   G  A  AAAACC       UUUCUGU   UGUAAAAAA UUA AC  G
    | ||  |||||| ||   |  |  ||||||       |||||||   ||||||||| ||| ||
    G UA  ACGGGA GG   U  U  UUUUGG       AAAGACA   AUGUUUUUU GAU UG  U
UGUU G  GU      U  UGU GU GU      UCUGGAA       AUU         C   C  AA
Stem-loop sequence GAUUGAUUGUGUCCUCUUUGUGAAAAACCUUUCUGUGUUGUAAAAAAUUACACAUGUAAGUCUAGCUUUUUUGUAUUAACAGAAAAAGGUCUGGUUUUUGUUGUUGUGGUAGGGCAUGAUGGUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006592346.2
ncRNA:21   UGUUUCUCCUGUGUUAGUUAG   1
  ||||||||||||*|||||||*
targets:604   ACAAAGAGGACAGAAUCAAUA   624

2.5 PREDICTED: Glycine max equilibrative nucleotide transporter 3-like (LOC100784933), mRNA equilibrative nucleotide transporter 3-like(LOC100784933) coding protein psRNATarget