ncRNA ID | novel_gma_miR3594 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:14895032-14895157 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451675 |
Length | 21 |
Mature sequence(if miRNA) | 1 - GAUUGAUUGUGUCCUCUUUGU - 21 |
Stem-loop(if miRNA) |
-GAU G  UG      -  -UU UG --      -------       -GU         -   C  AU     U AU  UGUCCU CU   G  A  AAAACC       UUUCUGU   UGUAAAAAA UUA AC  G     | ||  |||||| ||   |  |  ||||||       |||||||   ||||||||| ||| ||     G UA  ACGGGA GG   U  U  UUUUGG       AAAGACA   AUGUUUUUU GAU UG  U UGUU G  GU      U  UGU GU GU      UCUGGAA       AUU         C   C  AA |
Stem-loop sequence | GAUUGAUUGUGUCCUCUUUGUGAAAAACCUUUCUGUGUUGUAAAAAAUUACACAUGUAAGUCUAGCUUUUUUGUAUUAACAGAAAAAGGUCUGGUUUUUGUUGUUGUGGUAGGGCAUGAUGGUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006592346.2 |
|
2.5 | PREDICTED: Glycine max equilibrative nucleotide transporter 3-like (LOC100784933), mRNA | equilibrative nucleotide transporter 3-like(LOC100784933) | coding protein | psRNATarget |