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BaseInfo

ncRNA ID	novel_gma_miR3593
Species	Glycine max
Class	miRNA
Genome position	Chr12:37928008-37928153 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	127 - CUAUUGUCGGAGGAAUUUUU - 146
Stem-loop(if miRNA)	-  A         -     ----UUUUUUUGUU   UG   -------UUUUC    UUU     -------UCUU      G  CU UUGUCGGAG GAAUU              UGC  GUA            GAUC   UUGGU           UAUUAU U  || ||||||||| |||||              |||  |||            ||||   |||||           ||||||  GG GGCGGUUUU CUUGG              AUG  CGU            UUAG   AACCA           GUGAUA U A  A         U     UUUUUCUAUUUUUU   GU   UUGUUUUUUUUU    --U     UACUCUACAUU      A
Stem-loop sequence	CUAUUGUCGGAGGAAUUUUUUUUUGUUUGCUGGUAUUUUCGAUCUUUUUGGUUCUUUAUUAUGUUAAUAGUGUUACAUCUCAUACCAAUGAUUUUUUUUUUUGUUUGCUGGUAUUUUUUAUCUUUUUGGUUCUUUUUGGCGGAGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006605919.2	ncRNA:20   UUUUUAAGGAGGCUGUUAUC   1   *|||*||||||||||||*|| targets:2121   UAAACUUCCUCCGACAAAAG   2140 Target Full Sequence	2.5	PREDICTED: Glycine max alpha-L-fucosidase 2-like (LOC100810387), transcript variant X5, mRNA	alpha-L-fucosidase 2-like(LOC100810387)	coding protein	psRNATarget
XM_006605918.2	ncRNA:20   UUUUUAAGGAGGCUGUUAUC   1   *|||*||||||||||||*|| targets:2126   UAAACUUCCUCCGACAAAAG   2145 Target Full Sequence	2.5	PREDICTED: Glycine max alpha-L-fucosidase 2-like (LOC100810387), transcript variant X4, mRNA	alpha-L-fucosidase 2-like(LOC100810387)	coding protein	psRNATarget
XM_006605917.2	ncRNA:20   UUUUUAAGGAGGCUGUUAUC   1   *|||*||||||||||||*|| targets:1990   UAAACUUCCUCCGACAAAAG   2009 Target Full Sequence	2.5	PREDICTED: Glycine max alpha-L-fucosidase 2-like (LOC100810387), transcript variant X3, mRNA	alpha-L-fucosidase 2-like(LOC100810387)	coding protein	psRNATarget
XM_003536555.3	ncRNA:20   UUUUUAAGGAGGCUGUUAUC   1   *|||*||||||||||||*|| targets:2004   UAAACUUCCUCCGACAAAAG   2023 Target Full Sequence	2.5	PREDICTED: Glycine max alpha-L-fucosidase 2-like (LOC100817294), mRNA	alpha-L-fucosidase 2-like(LOC100817294)	coding protein	psRNATarget
XM_003555233.3	ncRNA:20   UUUUUAAGGAGGCUGUUAUC   1   *|||*||||||||||||*|| targets:2110   UAAACUUCCUCCGACAAAAG   2129 Target Full Sequence	2.5	PREDICTED: Glycine max alpha-L-fucosidase 2-like (LOC100810387), transcript variant X1, mRNA	alpha-L-fucosidase 2-like(LOC100810387)	coding protein	psRNATarget
XM_006605916.2	ncRNA:20   UUUUUAAGGAGGCUGUUAUC   1   *|||*||||||||||||*|| targets:2265   UAAACUUCCUCCGACAAAAG   2284 Target Full Sequence	2.5	PREDICTED: Glycine max alpha-L-fucosidase 2-like (LOC100810387), transcript variant X2, mRNA	alpha-L-fucosidase 2-like(LOC100810387)	coding protein	psRNATarget