ncRNA ID | novel_gma_miR3592 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:38491976-38492064 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451674 |
Length | 20 |
Mature sequence(if miRNA) | 70 - UGCGUUUGGAUAUAGAAUUU - 89 |
Stem-loop(if miRNA) |
--U     UG    UA         C -GA     --GU     AU    GCGUU  GAUA  GAAUUUUAA U   GGAAA    AAUUU  C    |||||  ||||  ||||||||| |   |||||    |||||    CGUAG  UUGU  CUUAAGAUU A   UCUUU    UUAAG  A UUU     GU    UA         U AUG     AAGU     AG |
Stem-loop sequence | UGCGUUUGGAUAUAGAAUUUUAACUGAGGAAAGUAAUUUAUCAGAGAAUUUGAAUUUCUGUAAUUUAGAAUUCAUUGUUUGGAUGCUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT099387.1 |
|
2.0 | Soybean clone JCVI-FLGm-23J16 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
AK287089.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-43-O04 | NA | coding protein | psRNATarget | |||||||||
XM_003544879.3 |
|
2.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 11 (LOC100815088), mRNA | CBL-interacting serine/threonine-protein kinase 11(LOC100815088) | coding protein | psRNATarget |