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BaseInfo

ncRNA ID	novel_gma_miR3588
Species	Glycine max
Class	miRNA
Genome position	Chr9:36814939-36815128 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	171 - AGAUAAUGUCGAGAUAAACU - 190
Stem-loop(if miRNA)	--            C                U              C              A  A   -        A       A    A  CCU   UUUAUCUCGAUA UAUCUUUAUUUGAUGU GGACUUUAAUAUGC UCAUUUUUCUCAUG UU CCU GUCAUGUG GACUUUC ACAC CU   C   |||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||| || ||| |||||||| ||||||| |||| ||   U   AAAUAGAGCUGU AUAGAAAUAAGCUACA CCUGGAGUUGUACG AGUAAAAAGAGUAC AA GGA CGGUACAC CUGAAAG UGUG GA   A UC            A                U              A              C  -   G        C       A    -  UCU
Stem-loop sequence	UUUAUCUCGAUACUAUCUUUAUUUGAUGUUGGACUUUAAUAUGCCUCAUUUUUCUCAUGAUUACCUGUCAUGUGAGACUUUCAACACACUCCUCUAUCUAGGUGUAGAAAGUCCCACAUGGCGAGGAACCAUGAGAAAAAUGAAGCAUGUUGAGGUCCUACAUCGAAUAAAGAUAAUGUCGAGAUAAACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006578720.2	ncRNA:20   UCAAAUAGAGCUGUAAUAGA   1   |||*|=*||||||||||||| targets:1423   AGUGUGGCUCGACAUUAUCU   1442 Target Full Sequence	3.0	PREDICTED: Glycine max E3 ubiquitin-protein ligase RGLG1-like (LOC100776002), transcript variant X3, mRNA	E3 ubiquitin-protein ligase RGLG1-like(LOC100776002)	coding protein	psRNATarget
XM_006578719.2	ncRNA:20   UCAAAUAGAGCUGUAAUAGA   1   |||*|=*||||||||||||| targets:1453   AGUGUGGCUCGACAUUAUCU   1472 Target Full Sequence	3.0	PREDICTED: Glycine max E3 ubiquitin-protein ligase RGLG1-like (LOC100776002), transcript variant X2, mRNA	E3 ubiquitin-protein ligase RGLG1-like(LOC100776002)	coding protein	psRNATarget
XM_003523170.3	ncRNA:20   UCAAAUAGAGCUGUAAUAGA   1   |||*|=*||||||||||||| targets:1456   AGUGUGGCUCGACAUUAUCU   1475 Target Full Sequence	3.0	PREDICTED: Glycine max E3 ubiquitin-protein ligase RGLG1-like (LOC100776002), transcript variant X1, mRNA	E3 ubiquitin-protein ligase RGLG1-like(LOC100776002)	coding protein	psRNATarget
XM_014776950.1	ncRNA:20   UCAAAUAGAGCUGUAAUAGA   1   |||*|=*||||||||||||| targets:2277   AGUGUGGCUCGACAUUAUCU   2296 Target Full Sequence	3.0	PREDICTED: Glycine max E3 ubiquitin-protein ligase RGLG2 (LOC100813310), mRNA	E3 ubiquitin-protein ligase RGLG2(LOC100813310)	coding protein	psRNATarget