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BaseInfo

ncRNA ID novel_gma_miR3586
Species Glycine max
Class miRNA
Genome position Chr9:33369995-33370038 [+]
Reference genome Glycine_max_v2.0
Source SRR1451674
Length 20
Mature sequence(if miRNA) 25 - GUAAGAUUAUCAACUUUAAC - 44
Stem-loop(if miRNA) --   U      --  C    CU
  UGA GUUGGU  UC UAUU  A
  ||| ||||||  || ||||
  AUU CAACUA  AG AUGG  U
CA   U      UU  A    UU
Stem-loop sequence UGAUGUUGGUUCCUAUUCUAUUUGGUAAGAUUAUCAACUUUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532706.3
ncRNA:20   CAAUUUCAACUAUUAGAAUG   1
  *||=|||||||||||=||||
targets:1903   AUUGAAGUUGAUAAUUUUAC   1922

2.5 PREDICTED: Glycine max uncharacterized LOC100785552 (LOC100785552), mRNA uncharacterized LOC100785552(LOC100785552) coding protein psRNATarget
XM_006601647.2
ncRNA:20   CAAUUUCAACUAUUAGAAUG   1
  *|||||*||*||||||||||
targets:954   UUUAAAUUUAAUAAUCUUAC   973

2.5 PREDICTED: Glycine max probable alpha-amylase 2 (LOC100793671), mRNA probable alpha-amylase 2(LOC100793671) coding protein psRNATarget