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BaseInfo

ncRNA ID	novel_gma_miR3585
Species	Glycine max
Class	miRNA
Genome position	Chr9:4002400-4002569 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	1 - AACUGUUCAGAAUUUAUUGG - 20
Stem-loop(if miRNA)	AAA   ---GC      G   -   UAAG        CU     AGACC  GGAAUAGACUUGACAGUUACAGUUUUGACGACUGGCUUCU    CAA     UUUGAG AGU AUU    CAAUAAUC  AAUGC     CU                                        G    |||     |||||| ||| |||    ||||||||  |||||     ||    GUU     AGACUU UCA UAA    GUUGUUGG  UUAUG     GU                                        G --G   AUUUA      G   A   --UA        -U     -----  AAAGACGACCUUCUAACUCCAGUUUUCUAAACAUUGACCC
Stem-loop sequence	AAACAAGCUUUGAGGAGUAUUUAAGCAAUAAUCCUAAUGCAGACCCUGGAAUAGACUUGACAGUUACAGUUUUGACGACUGGCUUCUGGCCCAGUUACAAAUCUUUUGACCUCAAUCUUCCAGCAGAAAUGGUAUUUGGUUGUUGAUAAUAACUGUUCAGAAUUUAUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT099436.1	ncRNA:20   GGUUAUUUAAGACUUGUCAA   1   =|||*|||||=||||||||| targets:197   UCAAGAAAUUUUGAACAGUU   216 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-13F24 unknown mRNA	NA	coding protein	psRNATarget
XM_014764361.1	ncRNA:20   GGUUAUUUAAGACUUGUCAA   1   *||||*|||||||*|||||| targets:660   GCAAUCAAUUCUGCACAGUU   679 Target Full Sequence	2.5	PREDICTED: Glycine max protein prune homolog (LOC100802064), transcript variant X3, mRNA	protein prune homolog(LOC100802064)	coding protein	psRNATarget
XM_006591885.2	ncRNA:20   GGUUAUUUAAGACUUGUCAA   1   *||||*|||||||*|||||| targets:790   GCAAUCAAUUCUGCACAGUU   809 Target Full Sequence	2.5	PREDICTED: Glycine max protein prune homolog (LOC100802064), transcript variant X2, mRNA	protein prune homolog(LOC100802064)	coding protein	psRNATarget
XM_006591884.2	ncRNA:20   GGUUAUUUAAGACUUGUCAA   1   *||||*|||||||*|||||| targets:826   GCAAUCAAUUCUGCACAGUU   845 Target Full Sequence	2.5	PREDICTED: Glycine max protein prune homolog (LOC100802064), transcript variant X1, mRNA	protein prune homolog(LOC100802064)	coding protein	psRNATarget
XM_014771751.1	ncRNA:20   GGUUAUUUAAGACUUGUCAA   1   =|||*|=||||||||||||* targets:150   UCAAAAGAUUCUGAACAGUG   169 Target Full Sequence	3.0	PREDICTED: Glycine max two-component response regulator ARR22-like (LOC100819813), mRNA	two-component response regulator ARR22-like(LOC100819813)	coding protein	psRNATarget