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BaseInfo

ncRNA ID	novel_gma_miR3572
Species	Glycine max
Class	miRNA
Genome position	Chr8:6379040-6379120 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	62 - ACUUGUAAAUUUUAAGAUGU - 81
Stem-loop(if miRNA)	--          AA   C  -        ----UA   U  UU   AUUUUAAGAU  UAU AG AGUCUGGU      CUG UG  G   ||||||||||  ||| || ||||||||      ||| ||  G   UAGAAUUUUA  AUG UC UCAGACUA      GAC AU  A UG          -A   U  A        UUACUG   U  UA
Stem-loop sequence	AUUUUAAGAUAAUAUCAGAGUCUGGUUACUGUUGUUGGAAUUAUCAGGUCAUUAUCAGACUACUUGUAAAUUUUAAGAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003553221.3	ncRNA:20   UGUAGAAUUUUAAAUGUUCA   1   ||||||*||||||*|||||| targets:14   ACAUCUCAAAAUUAACAAGU   33 Target Full Sequence	2.5	PREDICTED: Glycine max GDSL esterase/lipase At5g33370-like (LOC100801497), mRNA	GDSL esterase/lipase At5g33370-like(LOC100801497)	coding protein	psRNATarget
XM_006575610.2	ncRNA:20   UGUAGAAUUUUAAAUGUUCA   1   |*||||||||||||*||||| targets:856   AAAUCUUAAAAUUUUCAAGU   875 Target Full Sequence	2.5	PREDICTED: Glycine max putative F-box/LRR-repeat protein At1g56400 (LOC102659419), mRNA	putative F-box/LRR-repeat protein At1g56400(LOC102659419)	coding protein	psRNATarget
XM_006595834.2	ncRNA:20   UGUAGAAUUUUAAA-UGUUCA   1   =|||||||||||||-|||||| targets:2896   GCAUCUUAAAAUUUCACAAGU   2916 Target Full Sequence	3.0	PREDICTED: Glycine max ARF guanine-nucleotide exchange factor GNOM-like (LOC100784083), transcript variant X1, mRNA	ARF guanine-nucleotide exchange factor GNOM-like(LOC100784083)	coding protein	psRNATarget
XM_003544148.3	ncRNA:20   UGUAGAAUUUUAAA-UGUUCA   1   =|||||||||||||-|||||| targets:3087   GCAUCUUAAAAUUUCACAAGU   3107 Target Full Sequence	3.0	PREDICTED: Glycine max ARF guanine-nucleotide exchange factor GNOM-like (LOC100784083), transcript variant X2, mRNA	ARF guanine-nucleotide exchange factor GNOM-like(LOC100784083)	coding protein	psRNATarget