ncRNA ID | novel_gma_miR3571 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:6086590-6086702 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451674 |
Length | 21 |
Mature sequence(if miRNA) | 93 - CAGGCCCAUGUCCAUAUGCUG - 113 |
Stem-loop(if miRNA) |
--     A   GA        U  -GG     CA -U     - UC  G    UUU  A   GCAUG GGA  GUGGGUUU CC   CUGAU  C  CGACG C  AC AGUG   UG G   ||||| |||  |||||||| ||   |||||  |  ||||| |  || ||||   ||   CGUAU CCU  UACCCGGA GG   GAUUG  G  GUUGC G  UG UCAU   GC A GU     A   -G        C  AGG     AG UU     U UU  A    -GU  U |
Stem-loop sequence | GCAUGAGGAGAGUGGGUUUUCCGGCUGAUCACUCGACGCUCACGAGUGUUUUGAGAUCGUGUACUAGUUUGUCGUUGUUGGAGUUAGGGAGGCAGGCCCAUGUCCAUAUGCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003542411.3 |
|
2.0 | PREDICTED: Glycine max cation/H(+) antiporter 20-like (LOC100805993), mRNA | cation/H(+) antiporter 20-like(LOC100805993) | coding protein | psRNATarget |