ncRNA ID | novel_gma_miR3556 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:15617448-15617490 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451674 |
Length | 20 |
Mature sequence(if miRNA) | 24 - CAAAUUCUACAUGUUUAUUU - 43 |
Stem-loop(if miRNA) |
--     -  UAC  G     U   CAAAU UC   AU UUUAU U   ||||| ||   || ||||| U   GUUUA AG   UG AAGUG G AA     C  -UU  G     U |
Stem-loop sequence | CAAAUUCUACAUGUUUAUUUUGUGUGAAGGUUUGACAUUUGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003548377.3 |
|
2.0 | PREDICTED: Glycine max GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like (LOC100801617), mRNA | GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like(LOC100801617) | coding protein | psRNATarget | |||||||||
XM_006603321.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC102665966 (LOC102665966), mRNA | uncharacterized LOC102665966(LOC102665966) | coding protein | psRNATarget |