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BaseInfo

ncRNA ID novel_gma_miR3556
Species Glycine max
Class miRNA
Genome position Chr7:15617448-15617490 [-]
Reference genome Glycine_max_v2.0
Source SRR1451674
Length 20
Mature sequence(if miRNA) 24 - CAAAUUCUACAUGUUUAUUU - 43
Stem-loop(if miRNA) --     -  UAC  G     U
  CAAAU UC   AU UUUAU U
  ||||| ||   || ||||| U
  GUUUA AG   UG AAGUG G
AA     C  -UU  G     U
Stem-loop sequence CAAAUUCUACAUGUUUAUUUUGUGUGAAGGUUUGACAUUUGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003548377.3
ncRNA:20   UUUAUUUGUACAUCUUAAAC   1
  =|||=||||||||||||||*
targets:990   GAAUGAACAUGUAGAAUUUC   1009

2.0 PREDICTED: Glycine max GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like (LOC100801617), mRNA GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like(LOC100801617) coding protein psRNATarget
XM_006603321.1
ncRNA:20   UUUAUUUGUACAUCUUAAAC   1
  =|||||*||||||||||||*
targets:630   GAAUAAUCAUGUAGAAUUUU   649

2.0 PREDICTED: Glycine max uncharacterized LOC102665966 (LOC102665966), mRNA uncharacterized LOC102665966(LOC102665966) coding protein psRNATarget