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BaseInfo

ncRNA ID novel_gma_miR3555
Species Glycine max
Class miRNA
Genome position Chr7:37640531-37640595 [-]
Reference genome Glycine_max_v2.0
Source SRR1451674
Length 21
Mature sequence(if miRNA) 45 - CUGAUUGAAAUUGAUGGAUAG - 65
Stem-loop(if miRNA) --C   U      UG U  A    ----AUC    
   UGA UGAAAU  A GG UAGG       CUCGG
   ||| ||||||  | || ||||       ||||A
   AUU ACUUUG  U CC AUCC       GAGCC
CAC   U      GU -  -    CCGACAA    
Stem-loop sequence CUGAUUGAAAUUGAUGGAUAGGAUCCUCGGACCGAGAACAGCCCCUACCUUGGUUUCAUUUACAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003542531.3
ncRNA:21   GAUAGGUAGUUAAAGUUAGUC   1
  *||||||||||||||||*||*
targets:324   AUAUCCAUCAAUUUCAACCAU   344

2.5 PREDICTED: Glycine max uncharacterized LOC100779070 (LOC100779070), mRNA uncharacterized LOC100779070(LOC100779070) coding protein psRNATarget
BT098736.1
ncRNA:21   GAUAGGUAGUUAAAGUUAGUC   1
  |*|*||||=||||||||||||
targets:219   CCACCCAUUAAUUUCAAUCAG   239

2.5 Soybean clone JCVI-FLGm-23I18 unknown mRNA NA coding protein psRNATarget