ncRNA ID | novel_gma_miR3552 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:17291004-17291095 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451674 |
Length | 20 |
Mature sequence(if miRNA) | 73 - AUGGUUUUCUGUGCUUGAGG - 92 |
Stem-loop(if miRNA) |
--   UU    UU         UGAAGA    CUCCAACACUGUAGAA   UCA  GCAU  GAGAACUGU      UCUU                G   |||  ||||  |||||||||      ||||                G   AGU  CGUG  CUUUUGGUA      GUGG                U GG   -U    -U         ---UGG    UUAAUUACAGAAGAGU |
Stem-loop sequence | UCAUUGCAUUUGAGAACUGUUGAAGAUCUUCUCCAACACUGUAGAAGGUUGAGAAGACAUUAAUUGGUGGGUAUGGUUUUCUGUGCUUGAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT090419.1 |
|
2.5 | Soybean clone JCVI-FLGm-18G19 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_003542564.3 |
|
2.5 | PREDICTED: Glycine max alpha/beta hydrolase domain-containing protein 17B-like (LOC100797115), transcript variant X1, mRNA | alpha/beta hydrolase domain-containing protein 17B-like(LOC100797115) | coding protein | psRNATarget |