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BaseInfo

ncRNA ID novel_gma_miR3551
Species Glycine max
Class miRNA
Genome position Chr6:15160943-15161015 [+]
Reference genome Glycine_max_v2.0
Source SRR1451674
Length 20
Mature sequence(if miRNA) 54 - CUAAUUUUGAAGUUUUAAGU - 73
Stem-loop(if miRNA) --      -G   C     -UU  U   UUU    UUC
  UUAAAA  UCA AAAUU   GG GGG   CAUU   C
  ||||||  ||| |||||   || |||   ||||
  AAUUUU  AGU UUUAA   UC CUC   GUAA   A
UG      GA   -     UCU  U   UCC    UUU
Stem-loop sequence UUAAAAGUCACAAAUUUUGGUGGGUUUCAUUUUCCAUUUAAUGCCUCUCUCUUCUAAUUUUGAAGUUUUAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT094669.1
ncRNA:20   UGAAUUUUGAAGUUUUAAUC   1
  |*||||||||||||||*|||
targets:116   AAUUAAAACUUCAAAAAUAG   135

2.5 Soybean clone JCVI-FLGm-5P6 unknown mRNA NA coding protein psRNATarget