Search result

BaseInfo

ncRNA ID novel_gma_miR3547
Species Glycine max
Class miRNA
Genome position Chr6:21001204-21001262 [-]
Reference genome Glycine_max_v2.0
Source SRR1292924;SRR1294485;SRR1294476
Length 24
Mature sequence(if miRNA) 1 - AAAUGGACCGGAUUUGAUGAUGAC - 24
Stem-loop(if miRNA) -----  U UG      -    A      AAU
     CA U  GGUCCG UCCA UUUAAU   A
     || |  |||||| |||| ||||||   A
     GU A  UUAGGC AGGU AAAUUA   U
CAGUA  - GU      C    -      AAA
Stem-loop sequence CAUUUGGGUCCGUCCAAUUUAAUAAUAAUAAAAUUAAAUGGACCGGAUUUGAUGAUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006604422.2
ncRNA:24   CAGUAGUAGUUUAGGCCAGGUAAA   1
  ||=-||||||=||=||||||||||
targets:494   GUU-UCAUCAGAUUCGGUCCAUUU   516

2.5 PREDICTED: Glycine max PRA1 family protein F2-like (LOC100794255), mRNA PRA1 family protein F2-like(LOC100794255) coding protein psRNATarget