Search result

BaseInfo

ncRNA ID	novel_gma_miR3545
Species	Glycine max
Class	miRNA
Genome position	Chr6:28098780-28098835 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	21
Mature sequence(if miRNA)	1 - UUGUGCAUGAAUUUCUGAAGG - 21
Stem-loop(if miRNA)	--     -UU        UG UUAUAC   U   UUUAG   UUCAUGUA  G      ACA U   |||||   ||||||||  |      ||| U   AAGUC   AAGUACGU  U      UGU C GG     UUU        GU ------   U
Stem-loop sequence	UUUAGUUUUCAUGUAUGGUUAUACACAUUUCUUGUUUGUGCAUGAAUUUCUGAAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003520567.3	ncRNA:21   GGAAGUCUUUAAGUACGUGUU   1   **||=|*=||||||||||||| targets:2630   AGUUUAUGAAUUCAUGCACAA   2650 Target Full Sequence	3.0	PREDICTED: Glycine max leucine-rich repeat receptor-like protein kinase PXL2 (LOC100789665), mRNA	leucine-rich repeat receptor-like protein kinase PXL2(LOC100789665)	coding protein	psRNATarget
XM_003553462.3	ncRNA:21   GGAAGUCUUUAAGUACGUGUU   1   **||=|*=||||||||||||| targets:2696   AGUUUAUGAAUUCAUGCACAA   2716 Target Full Sequence	3.0	PREDICTED: Glycine max leucine-rich repeat receptor-like protein kinase PXL2 (LOC100811284), mRNA	leucine-rich repeat receptor-like protein kinase PXL2(LOC100811284)	coding protein	psRNATarget