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BaseInfo

ncRNA ID	novel_gma_miR3543
Species	Glycine max
Class	miRNA
Genome position	Chr6:50033172-50033210 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	1 - AGUAAUGUUUCAUUUUUCUC - 20
Stem-loop(if miRNA)	--       --U       U   GAAGAAU   AUGUUGC G   |||||||   ||||||| U   CUUUUUA   UGUAAUG A CU       CUU       A
Stem-loop sequence	GAAGAAUUAUGUUGCUGUAAGUAAUGUUUCAUUUUUCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT099265.1	ncRNA:20   CUCUUUUUACUUUGUAAUGA   1   *||=|||||*|||||||||| targets:489   AAGGAAAAUCAAACAUUACU   508 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-16L22 unknown mRNA	NA	coding protein	psRNATarget
KT031175.1	ncRNA:20   CUCUUUUUACUUUGUAAUGA   1   *||=|||||*|||||||||| targets:328   AAGGAAAAUCAAACAUUACU   347 Target Full Sequence	2.5	Glycine max clone HN_WYQ_3 homeodomain/HOMEOBOX transcription factor (Glyma07g05800.1) mRNA, partial cds	NA	coding protein	psRNATarget
AK245374.1	ncRNA:20   CUCUUUUUACUUUGUAAUGA   1   *||=|||||*|||||||||| targets:492   AAGGAAAAUCAAACAUUACU   511 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-28-M17	NA	coding protein	psRNATarget
XM_003528727.3	ncRNA:20   CUCUUUUUACUUUGUAAUGA   1   *||=|||||*|||||||||| targets:505   AAGGAAAAUCAAACAUUACU   524 Target Full Sequence	2.5	PREDICTED: Glycine max homeobox-leucine zipper protein ATHB-12-like (LOC100797862), mRNA	homeobox-leucine zipper protein ATHB-12-like(LOC100797862)	coding protein	psRNATarget
XM_003554549.3	ncRNA:20   CUCUUUUUACUUUGUAAUGA   1   *||||*||||=||||||||| targets:1072   AAGAAUAAUGGAACAUUACU   1091 Target Full Sequence	2.5	PREDICTED: Glycine max G patch domain-containing protein 8-like (LOC100793206), mRNA	G patch domain-containing protein 8-like(LOC100793206)	coding protein	psRNATarget