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BaseInfo

ncRNA ID	novel_gma_miR3536
Species	Glycine max
Class	miRNA
Genome position	Chr5:26267417-26267489 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	21
Mature sequence(if miRNA)	53 - UGUUGUAUUUGUAUUUGUAUU - 73
Stem-loop(if miRNA)	--         UG  UUU    -UU   ---G     A   UGUUGUAUU  UA   GUAU   CUA    CCAUU G   |||||||||  ||   ||||   |||    ||||| G   ACGAUAUGA  AU   UAUA   GAU    GGUAG A UU         GU  UGU    UUU   AUAA     U
Stem-loop sequence	UGUUGUAUUUGUAUUUGUAUUUCUAGCCAUUAGGAUGAUGGAAUAUAGUUUAUAUUGUUAUGAGUAUAGCAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014769215.1	ncRNA:21   UUAUGUUUAUGUUUAUGUUGU   1   ||||||||||||||||||||| targets:1813   AAUACAAAUACAAAUACAACA   1833 Target Full Sequence	0.0	PREDICTED: Glycine max phosphoinositide phospholipase C 2-like (LOC100803394), mRNA	phosphoinositide phospholipase C 2-like(LOC100803394)	coding protein	psRNATarget
NM_001251539.1	ncRNA:21   UUAUGUUUAUGUUUAUGUUGU   1   =*||||||||||||||||||| targets:430   GUUACAAAUACAAAUACAACA   450 Target Full Sequence	0.0	Glycine max uncharacterized LOC100306413 (LOC100306413), mRNA	uncharacterized LOC100306413(LOC100306413)	coding protein	psRNATarget
BT090500.1	ncRNA:21   UUAUGUUUAUGUUUAUGUUGU   1   =*||||||||||||||||||| targets:430   GUUACAAAUACAAAUACAACA   450 Target Full Sequence	0.0	Soybean clone JCVI-FLGm-4L9 unknown mRNA	NA	coding protein	psRNATarget
XM_006590198.2	ncRNA:21   UUAUGUUUAUGUUUAUGUUGU   1   =*||||||||||||||||||| targets:480   GUUACAAAUACAAAUACAACA   500 Target Full Sequence	0.0	PREDICTED: Glycine max uncharacterized LOC100306413 (LOC100306413), transcript variant X1, mRNA	uncharacterized LOC100306413(LOC100306413)	coding protein	psRNATarget
XM_014768521.1	ncRNA:21   UUAUGUUUAUGUUUAUGUUGU   1   |||||||=|||||=||||||| targets:19   AAUACAAGUACAAGUACAACA   39 Target Full Sequence	2.5	PREDICTED: Glycine max abscisic acid 8'-hydroxylase 1-like (LOC100779810), transcript variant X2, mRNA	abscisic acid 8'-hydroxylase 1-like(LOC100779810)	coding protein	psRNATarget
XM_003547688.3	ncRNA:21   UUAUGUUUAUGUUUAUGUUGU   1   |||||||=|||||=||||||| targets:13   AAUACAAGUACAAGUACAACA   33 Target Full Sequence	2.5	PREDICTED: Glycine max abscisic acid 8'-hydroxylase 1-like (LOC100779810), transcript variant X1, mRNA	abscisic acid 8'-hydroxylase 1-like(LOC100779810)	coding protein	psRNATarget
XM_003539320.3	ncRNA:21   UUAUGUUUAUGUUUAUGUUGU   1   |=||||||||||||||||=|* targets:21   AGUACAAAUACAAAUACAGCC   41 Target Full Sequence	2.5	PREDICTED: Glycine max spermidine hydroxycinnamoyl transferase-like (LOC100805962), mRNA	spermidine hydroxycinnamoyl transferase-like(LOC100805962)	coding protein	psRNATarget
XM_003539318.3	ncRNA:21   UUAUGUUUAUGUUUAUGUUGU   1   |=||||||||||||||||=|* targets:21   AGUACAAAUACAAAUACAGCC   41 Target Full Sequence	2.5	PREDICTED: Glycine max spermidine hydroxycinnamoyl transferase-like (LOC100804886), mRNA	spermidine hydroxycinnamoyl transferase-like(LOC100804886)	coding protein	psRNATarget
XM_003550359.3	ncRNA:21   UUAUGUUUAUGUUUAUGUUGU   1   |=*|||||||||||*|||||| targets:138   AGCACAAAUACAAAAACAACA   158 Target Full Sequence	2.5	PREDICTED: Glycine max protein SHI RELATED SEQUENCE 1-like (LOC100807290), mRNA	protein SHI RELATED SEQUENCE 1-like(LOC100807290)	coding protein	psRNATarget
XM_006590691.2	ncRNA:21   UUAUGUUUAUGU-UUAUGUUGU   1   =|||||||||||-||||||||| targets:1969   GAUACAAAUACACAAUACAACA   1990 Target Full Sequence	3.0	PREDICTED: Glycine max probable protein phosphatase 2C 47 (LOC100781874), mRNA	probable protein phosphatase 2C 47(LOC100781874)	coding protein	psRNATarget
XM_003555676.3	ncRNA:21   UUAUGUUUAU-GUUUAUGUUGU   1   =*||||||||-||||||||||| targets:935   GUUACAAAUAUCAAAUACAACA   956 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100813442 (LOC100813442), mRNA	uncharacterized LOC100813442(LOC100813442)	coding protein	psRNATarget