ncRNA ID | novel_gma_miR3533 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:506442-506512 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451674 |
Length | 20 |
Mature sequence(if miRNA) | 52 - UUAAAUUUUUGGCUAAAGGA - 71 |
Stem-loop(if miRNA) |
-   A         UAUUG       -    -GA  G  CUU UGGCCAGAA     UGAAAAG AAAG   AG G  ||| |||||||||     ||||||| ||||   ||  GGA AUCGGUUUU     AUUUUUU UUUU   UU A A   A         --UAA       A    AUG  A |
Stem-loop sequence | CUUAUGGCCAGAAUAUUGUGAAAAGAAAGGAAGGGAAUUGUAUUUUAUUUUUUAAAUUUUUGGCUAAAGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003541977.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100787251 (LOC100787251), mRNA | uncharacterized LOC100787251(LOC100787251) | coding protein | psRNATarget | |||||||||
XM_006580058.2 |
|
3.0 | PREDICTED: Glycine max glutamate-rich WD repeat-containing protein 1 (LOC100799936), mRNA | glutamate-rich WD repeat-containing protein 1(LOC100799936) | coding protein | psRNATarget |