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BaseInfo

ncRNA ID	novel_gma_miR3527
Species	Glycine max
Class	miRNA
Genome position	Chr4:48234887-48234944 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	1 - UCAUCUUUUUUCAAUGAUAC - 20
Stem-loop(if miRNA)	--          UCA  G  A    UAUU   UCAUCUUUUU   AU AU CAGA    G   ||||||||||   || || ||||   AGUGGAGGAG   UG UA GUCU    A AU          UAG  G  C    UCAA
Stem-loop sequence	UCAUCUUUUUUCAAUGAUACAGAUAUUGAAACUUCUGCAUGGUGAUGAGGAGGUGAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014777892.1	ncRNA:20   CAUAGUAACUUUUUUCUACU   1   *||||=|||||||||||*|| targets:443   CUAUCGUUGAAAAAAGAAGA   462 Target Full Sequence	2.5	PREDICTED: Glycine max nuclear poly(A) polymerase 1-like (LOC100815801), transcript variant X2, mRNA	nuclear poly(A) polymerase 1-like(LOC100815801)	coding protein	psRNATarget
XM_014777891.1	ncRNA:20   CAUAGUAACUUUUUUCUACU   1   *||||=|||||||||||*|| targets:504   CUAUCGUUGAAAAAAGAAGA   523 Target Full Sequence	2.5	PREDICTED: Glycine max nuclear poly(A) polymerase 1-like (LOC100815801), transcript variant X1, mRNA	nuclear poly(A) polymerase 1-like(LOC100815801)	coding protein	psRNATarget
XM_006588586.2	ncRNA:20   CAUAGUAACUUUUUUCUACU   1   |||||*||||||||||*||| targets:3740   GUAUCUUUGAAAAAAGUUGA   3759 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100797045 (LOC100797045), transcript variant X2, mRNA	uncharacterized LOC100797045(LOC100797045)	coding protein	psRNATarget
XM_006588585.2	ncRNA:20   CAUAGUAACUUUUUUCUACU   1   |||||*||||||||||*||| targets:3740   GUAUCUUUGAAAAAAGUUGA   3759 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100797045 (LOC100797045), transcript variant X1, mRNA	uncharacterized LOC100797045(LOC100797045)	coding protein	psRNATarget