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BaseInfo

ncRNA ID	novel_gma_miR3526
Species	Glycine max
Class	miRNA
Genome position	Chr3:39756927-39757122 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	177 - CUCACUCUCUCACCAACAAA - 196
Stem-loop(if miRNA)	--      -AU   C    -----AU   - UCUUGUUCCUGGACCUGGUUACCUUGUUCAUGUGUGGGGACCACAAAGUUUUUAACCCAGCAAUUCAGCA   UGUUGG   GGG GUGA       GGA G                                                                      C   ||||||   ||| ||||       ||| |                                                                      C   ACAACC   CUC CACU       GAC C                                                                      A AA      ACU   U    CAAAAAU   U AAUGAUAAAACAUUAGGAUGGAUGGCUUCAUUUUUCACGCCACCCACUGUAGUUGUGGUUGGGAAAGAAG
Stem-loop sequence	UGUUGGAUGGGCGUGAAUGGAGUCUUGUUCCUGGACCUGGUUACCUUGUUCAUGUGUGGGGACCACAAAGUUUUUAACCCAGCAAUUCAGCACCAGAAGAAAGGGUUGGUGUUGAUGUCACCCACCGCACUUUUUACUUCGGUAGGUAGGAUUACAAAAUAGUAACUCAGUAAAAACUCACUCUCUCACCAACAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ340245.1	ncRNA:20   AAACAACCACUCUCUCACUC   1   *|*||||||||||||||||| targets:610   GUGGUUGGUGAGAGAGUGAG   629 Target Full Sequence	1.0	Glycine max cytochrome P450 monooxygenase CYP89H3 (CYP89H3) mRNA, partial cds	NA	coding protein	psRNATarget
XM_003556148.3	ncRNA:20   AAACAACCACUCUCUCACUC   1   *|*||||||||||||||||| targets:1153   GUGGUUGGUGAGAGAGUGAG   1172 Target Full Sequence	1.0	PREDICTED: Glycine max cytochrome P450 89A2 (LOC100795683), mRNA	cytochrome P450 89A2(LOC100795683)	coding protein	psRNATarget
XM_006598802.2	ncRNA:20   AAACAACCACUCUCUCACUC   1   ||||||||||||||||*||| targets:112   UUUGUUGGUGAGAGAGAGAG   131 Target Full Sequence	1.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 8-like (LOC100782508), transcript variant X3, mRNA	CBL-interacting serine/threonine-protein kinase 8-like(LOC100782508)	coding protein	psRNATarget
XM_003548344.3	ncRNA:20   AAACAACCACUCUCUCACUC   1   ||||||||||||||||*||| targets:112   UUUGUUGGUGAGAGAGAGAG   131 Target Full Sequence	1.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 8-like (LOC100782508), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 8-like(LOC100782508)	coding protein	psRNATarget
XM_006598801.2	ncRNA:20   AAACAACCACUCUCUCACUC   1   ||||||||||||||||*||| targets:111   UUUGUUGGUGAGAGAGAGAG   130 Target Full Sequence	1.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 8-like (LOC100782508), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 8-like(LOC100782508)	coding protein	psRNATarget
BT098738.1	ncRNA:20   AAACAACCACUCUCUCACUC   1   *|||*||||||||||||||* targets:487   AUUGCUGGUGAGAGAGUGAU   506 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-12N2 unknown mRNA	NA	coding protein	psRNATarget
XM_014764342.1	ncRNA:20   AAACAACCACUCUCUCACUC   1   ||||||||||||||||*||* targets:484   UUUGUUGGUGAGAGAGGGAA   503 Target Full Sequence	2.5	PREDICTED: Glycine max probable WRKY transcription factor 61 (LOC100809801), mRNA	probable WRKY transcription factor 61(LOC100809801)	coding protein	psRNATarget
XM_006584838.2	ncRNA:20   AAAC---AACCACUCUCUCACUC   1   *|||---|||||||||||||||| targets:261   AUUGGUAUUGGUGAGAGAGUGAG   283 Target Full Sequence	3.0	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC100783041), transcript variant X4, mRNA	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial(LOC100783041)	coding protein	psRNATarget