ncRNA ID | novel_gma_miR3521 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:26683476-26683581 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451674 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UACAUCAAUGUGGAAUUUUUC - 21 |
Stem-loop(if miRNA) |
-AAAAUG     -CCC      ------------   A -      G     UUUCUUG        UCCAC    AUGUAA            GGA C GUCUUU AGCUA       U        |||||    ||||||            ||| | |||||| |||||       U        AGGUG    UACAUU            CCU G CAGGAA UCGGU       C CUUUUUA     UAAC      UUGUAUUUUAUA   C A      G     CUUUUUA |
Stem-loop sequence | AAAAUGUCCACCCCAUGUAAGGAACGUCUUUGAGCUAUUUCUUGUUCAUUUUUCUGGCUGAAGGACAGCUCCAUAUUUUAUGUUUUACAUCAAUGUGGAAUUUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014772735.1 |
|
1.5 | PREDICTED: Glycine max protein FAR1-RELATED SEQUENCE 3-like (LOC100786516), transcript variant X2, mRNA | protein FAR1-RELATED SEQUENCE 3-like(LOC100786516) | coding protein | psRNATarget | |||||||||
XM_006605569.2 |
|
1.5 | PREDICTED: Glycine max protein FAR1-RELATED SEQUENCE 3-like (LOC100786516), transcript variant X1, mRNA | protein FAR1-RELATED SEQUENCE 3-like(LOC100786516) | coding protein | psRNATarget | |||||||||
XM_006605570.2 |
|
1.5 | PREDICTED: Glycine max protein FAR1-RELATED SEQUENCE 3-like (LOC100786516), transcript variant X3, mRNA | protein FAR1-RELATED SEQUENCE 3-like(LOC100786516) | coding protein | psRNATarget |