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BaseInfo

ncRNA ID	novel_gma_miR3516
Species	Glycine max
Class	miRNA
Genome position	Chr3:43197451-43197598 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	129 - GCUUUUUCUUUGUUACUUUU - 148
Stem-loop(if miRNA)	--       C    UAU      -CCACC     --   UUCAAAAUU       UUACAAA     GGCUU      G   AGGUGGC AGAG   GAGGCA      GCACU  ACA         UUGUACC       GUAAU     GAGUAA A   ||||||| ||||   ||||||      |||||  |||         |||||||       |||||     |||||| C   UUCAUUG UUUC   UUUCGU      UGUGA  UGU         AACAUGG       CAUUA     CUUAUU U UU       -    -UU      ACUAAA     AU   UUCAUUCAU       -----CA     -AACU      A
Stem-loop sequence	AGGUGGCCAGAGUAUGAGGCACCACCGCACUACAUUCAAAAUUUUGUACCUUACAAAGUAAUGGCUUGAGUAAGACUAUUAUUCUCAAAUUACACGGUACAAUACUUACUUUGUUAAGUGUAAAUCAUGCUUUUUCUUUGUUACUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003524462.3	ncRNA:20   UUUUCAUUGUUUCUUUUUCG   1   ||||||||*||||||||||= targets:79   AAAAGUAAAAAAGAAAAAGU   98 Target Full Sequence	2.5	PREDICTED: Glycine max oleosin 1-like (LOC100809872), mRNA	oleosin 1-like(LOC100809872)	coding protein	psRNATarget
XM_014767361.1	ncRNA:20   UUUUCA--UUGUUUCUUUUUCG   1   *|||||--|||||||||||||| targets:225   CAAAGUCAAACAAAGAAAAAGC   246 Target Full Sequence	2.5	PREDICTED: Glycine max bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like (LOC100803887), transcript variant X3, mRNA	bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like(LOC100803887)	coding protein	psRNATarget
XM_003523731.3	ncRNA:20   UUUUCAUUGUUUCUUUUUCG   1   ||||||||*||||||||||* targets:75   AAAAGUAAAAAAGAAAAAGA   94 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine-protein kinase-like protein At1g28390 (LOC100799382), mRNA	serine/threonine-protein kinase-like protein At1g28390(LOC100799382)	coding protein	psRNATarget
BT092198.1	ncRNA:20   UUUUCAUUGUUUCUUUUUCG   1   |||||*||*||||||||||| targets:504   AAAAGAAAGAAAGAAAAAGC   523 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-10G12 unknown mRNA	NA	coding protein	psRNATarget
NM_001248074.2	ncRNA:20   UUUUCAUUGUUUCUUUUUCG   1   |||||*||*||||||||||| targets:502   AAAAGAAAGAAAGAAAAAGC   521 Target Full Sequence	2.5	Glycine max uncharacterized LOC100527363 (LOC100527363), mRNA	uncharacterized LOC100527363(LOC100527363)	coding protein	psRNATarget