Search result

BaseInfo

ncRNA ID novel_gma_miR3511
Species Glycine max
Class miRNA
Genome position Chr2:1131557-1131606 [-]
Reference genome Glycine_max_v2.0
Source SRR1451674
Length 20
Mature sequence(if miRNA) 31 - AUUACAAAUUGGAGUAAGCC - 50
Stem-loop(if miRNA) --        -  G   U   -  GA
  AUUACAAA UU GAG AAG CC  A
  |||||||| || ||| ||| ||  U
  UGGUGUUU GA UUU UUC GG  C
GA        U  G   -   U  AC
Stem-loop sequence AUUACAAAUUGGAGUAAGCCGAAUCCAGGUCUUUUUGAGUUUUGUGGUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003554000.3
ncRNA:20   CCGAAUGAGGUUAAACAUUA   1
  |||||||*|||||||||||*
targets:2209   GGCUUACACCAAUUUGUAAA   2228

2.5 PREDICTED: Glycine max cationic amino acid transporter 4, vacuolar-like (LOC100810218), transcript variant X1, mRNA cationic amino acid transporter 4, vacuolar-like(LOC100810218) coding protein psRNATarget