ncRNA ID | novel_gma_miR3510 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:3801564-3801655 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451674 |
Length | 21 |
Mature sequence(if miRNA) | 72 - AGGAGCAAACCAGAUGAACCU - 92 |
Stem-loop(if miRNA) |
--AG  G     C        -CUUCUAAU    CCUCC       G     GA CAAAC AGAUGAAC         GGAA     AAUUCAU A     || ||||| ||||||||         ||||     ||||||| A     UU GUUUG UCUACUUG         CCUU     UUAAGUG A UAAG  G     A        AAACCACUU    --CUU       U |
Stem-loop sequence | AGGAGCAAACCAGAUGAACCUUCUAAUGGAACCUCCAAUUCAUGAAAUGUGAAUUUUCUUCCUUCACCAAAGUUCAUCUAGUUUGGUUGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006597371.2 |
|
2.5 | PREDICTED: Glycine max E3 ubiquitin-protein ligase RMA1H1-like (LOC100816864), transcript variant X3, mRNA | E3 ubiquitin-protein ligase RMA1H1-like(LOC100816864) | coding protein | psRNATarget |