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BaseInfo

ncRNA ID novel_gma_miR3510
Species Glycine max
Class miRNA
Genome position Chr2:3801564-3801655 [-]
Reference genome Glycine_max_v2.0
Source SRR1451674
Length 21
Mature sequence(if miRNA) 72 - AGGAGCAAACCAGAUGAACCU - 92
Stem-loop(if miRNA) --AG  G     C        -CUUCUAAU    CCUCC       G
    GA CAAAC AGAUGAAC         GGAA     AAUUCAU A
    || ||||| ||||||||         ||||     ||||||| A
    UU GUUUG UCUACUUG         CCUU     UUAAGUG A
UAAG  G     A        AAACCACUU    --CUU       U
Stem-loop sequence AGGAGCAAACCAGAUGAACCUUCUAAUGGAACCUCCAAUUCAUGAAAUGUGAAUUUUCUUCCUUCACCAAAGUUCAUCUAGUUUGGUUGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006597371.2
ncRNA:21   UCCAAGUAGACCAAACGAGGA   1
  ***||||||||||||||||*|
targets:161   UUUUUCAUCUGGUUUGCUCGU   181

2.5 PREDICTED: Glycine max E3 ubiquitin-protein ligase RMA1H1-like (LOC100816864), transcript variant X3, mRNA E3 ubiquitin-protein ligase RMA1H1-like(LOC100816864) coding protein psRNATarget