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BaseInfo

ncRNA ID	novel_gma_miR3509
Species	Glycine max
Class	miRNA
Genome position	Chr2:13873524-13873580 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	38 - GUUGUUGUUUGGAUUUUUGG - 57
Stem-loop(if miRNA)	--GU       UG   U   G A  -  A     UGUUGUU  GAU UUU G UA UG G     |||||||  ||| ||| | || ||     AUAACGA  CUG GAA U AU AC U AUGU       GU   U   G A  C  U
Stem-loop sequence	GUUGUUGUUUGGAUUUUUGGAUAUGAGUUCACUAAUGAAGUGUCUGAGCAAUAUGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003523848.3	ncRNA:20   GGUUUUUAGGUUUGUUGUUG   1   =||||||||||||||||||= targets:99   UCAAAAAUCCAAACAACAAU   118 Target Full Sequence	1.0	PREDICTED: Glycine max serpin-ZX-like (LOC100775287), mRNA	serpin-ZX-like(LOC100775287)	coding protein	psRNATarget
XM_006587296.2	ncRNA:20   GGUUUUUAGGUUUGUUGUUG   1   |||||||||*|||||||||| targets:254   CCAAAAAUCAAAACAACAAC   273 Target Full Sequence	1.5	PREDICTED: Glycine max protein DETOXIFICATION 49-like (LOC100788027), mRNA	protein DETOXIFICATION 49-like(LOC100788027)	coding protein	psRNATarget
BT096230.1	ncRNA:20   GGUUUUUAGGUUUGUUGUUG   1   =|=||||||||||||||||= targets:6   UCGAAAAUCCAAACAACAAU   25 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-20F19 unknown mRNA	NA	coding protein	psRNATarget
AK286783.1	ncRNA:20   GGUUUUUAGGUUUGUUGUUG   1   =|=||||||||||||||||= targets:11   UCGAAAAUCCAAACAACAAU   30 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-36-J20	NA	coding protein	psRNATarget
XM_003528182.3	ncRNA:20   GGUUUUUAGGUUUGUUGUUG   1   =|=||||||||||||||||= targets:95   UCGAAAAUCCAAACAACAAU   114 Target Full Sequence	2.0	PREDICTED: Glycine max serpin-ZX-like (LOC100806180), mRNA	serpin-ZX-like(LOC100806180)	coding protein	psRNATarget
XM_006604972.1	ncRNA:20   GGUUUUUAGGUUUGUUGUUG   1   ||||*||||||||||||||= targets:770   CCAACAAUCCAAACAACAAU   789 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC102664868 (LOC102664868), mRNA	uncharacterized LOC102664868(LOC102664868)	coding protein	psRNATarget
XM_014762941.1	ncRNA:20   GGUUUUUAGGUUUGUUGUUG   1   ||*|||*||||||||||||| targets:411   CCUAAAUUCCAAACAACAAC   430 Target Full Sequence	2.0	PREDICTED: Glycine max myb-related protein Myb4-like (LOC106794951), mRNA	myb-related protein Myb4-like(LOC106794951)	coding protein	psRNATarget
XM_006596087.2	ncRNA:20   GGUUUUUAGGUUUGUUGUUG   1   *||||=||||*||||||||| targets:110   GCAAAGAUCCCAACAACAAC   129 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100790811 (LOC100790811), transcript variant X3, mRNA	uncharacterized LOC100790811(LOC100790811)	coding protein	psRNATarget
XM_003544591.3	ncRNA:20   GGUUUUUAGGUUUGUUGUUG   1   *||||=||||*||||||||| targets:110   GCAAAGAUCCCAACAACAAC   129 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100790811 (LOC100790811), transcript variant X2, mRNA	uncharacterized LOC100790811(LOC100790811)	coding protein	psRNATarget
XM_003544592.3	ncRNA:20   GGUUUUUAGGUUUGUUGUUG   1   *||||=||||*||||||||| targets:110   GCAAAGAUCCCAACAACAAC   129 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100790811 (LOC100790811), transcript variant X1, mRNA	uncharacterized LOC100790811(LOC100790811)	coding protein	psRNATarget
XM_006594935.2	ncRNA:20   GGUUUUUAGGUUUGUUGUUG   1   ||*||||*|||||||||||| targets:195   CCCAAAACCCAAACAACAAC   214 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100805811 (LOC100805811), transcript variant X2, mRNA	uncharacterized LOC100805811(LOC100805811)	coding protein	psRNATarget
XM_006594934.2	ncRNA:20   GGUUUUUAGGUUUGUUGUUG   1   ||*||||*|||||||||||| targets:194   CCCAAAACCCAAACAACAAC   213 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100805811 (LOC100805811), transcript variant X1, mRNA	uncharacterized LOC100805811(LOC100805811)	coding protein	psRNATarget