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BaseInfo

ncRNA ID	novel_gma_miR3500
Species	Glycine max
Class	miRNA
Genome position	Chr20:746121-746240 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	1 - UUGGCUUCAAUUUGGACUGC - 20
Stem-loop(if miRNA)	--    CU    -      CU   -U  -------      UUCUU    GCCUCC     -    - G   UUGG  UCAA UUUGGA  GCA  GA       AAUGGA     CUGU      UGUUG CUUU G A   ||||  |||| ||||||  |||  ||       ||||||     ||||      ||||| |||| |   AACC  AGUU AAACUU  CGU  CU       UUACCU     GACG      ACGAC GAAG C A UA    --    C      -U   CC  AAAGUCC      -CAUU    ---AAU     A    U A
Stem-loop sequence	UUGGCUUCAAUUUGGACUGCAUGAAAUGGAUUCUUCUGUGCCUCCUGUUGCUUUGGAAACUGAAGACAGCAUAAGCAGUUACUCCAUUCCUGAAAUCCCUGCUUUCAAACUUGACCAAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003540748.3	ncRNA:20   CGUCAGGUUUAACUUCGGUU   1   *||||=|||||||||||||= targets:3203   UCAGUUCAAAUUGAAGCCAG   3222 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100817881 (LOC100817881), transcript variant X2, mRNA	uncharacterized LOC100817881(LOC100817881)	coding protein	psRNATarget
XM_006592258.2	ncRNA:20   CGUCAGGUUUAACUUCGGUU   1   *||||=|||||||||||||= targets:3318   UCAGUUCAAAUUGAAGCCAG   3337 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100817881 (LOC100817881), transcript variant X1, mRNA	uncharacterized LOC100817881(LOC100817881)	coding protein	psRNATarget
XM_006592259.2	ncRNA:20   CGUCAGGUUUAACUUCGGUU   1   *||||=|||||||||||||= targets:3409   UCAGUUCAAAUUGAAGCCAG   3428 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100817881 (LOC100817881), transcript variant X3, mRNA	uncharacterized LOC100817881(LOC100817881)	coding protein	psRNATarget