ncRNA ID | novel_gma_miR3497 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:23823899-23823993 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451674 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUUUCUCUACUUUUAAUCUC - 20 |
Stem-loop(if miRNA) |
--      UGAGUU      --U      GAGA   -       AG A   G   GAUUAG      GUAGAG   GAUUGU    UGC UGAGAAG  G GGA G   ||||||      ||||||   ||||||    ||| |||||||  | |||   CUAAUU      CAUCUC   UUGACG    AUG GUUCUUC  C CCU G CU      ----UU      UUU      AGGA   U       -G -   A |
Stem-loop sequence | GAUUAGUGAGUUGUAGAGUGAUUGUGAGAUGCUGAGAAGAGGAGGAGGGAUCCCGCUUCUUGUGUAAGGAGCAGUUUUUCUCUACUUUUAAUCUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003543807.3 |
|
2.5 | PREDICTED: Glycine max NAC domain-containing protein 100-like (LOC100781383), mRNA | NAC domain-containing protein 100-like(LOC100781383) | coding protein | psRNATarget | |||||||||
XM_003546196.3 |
|
2.5 | PREDICTED: Glycine max katanin p60 ATPase-containing subunit A1-like (LOC100801219), mRNA | katanin p60 ATPase-containing subunit A1-like(LOC100801219) | coding protein | psRNATarget | |||||||||
XM_003547064.3 |
|
3.0 | PREDICTED: Glycine max transcription factor ILR3-like (LOC100790993), mRNA | transcription factor ILR3-like(LOC100790993) | coding protein | psRNATarget |