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BaseInfo

ncRNA ID	novel_gma_miR3495
Species	Glycine max
Class	miRNA
Genome position	Chr20:36948337-36948405 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	50 - UUCCUUGAAUGGUUGGGGAA - 69
Stem-loop(if miRNA)	--    UU    GG       AG GGG G    UAA   UUCC  GAAU  UUGGGGA  G   U GAAC   A   ||||  ||||  |||||||  |   | ||||   G   GAGG  CUUA  GAUCUCU  U   A UUUG   A AA    --    GU       GU --A G    UUA
Stem-loop sequence	UUCCUUGAAUGGUUGGGGAAGGGGGUGGAACUAAAGAAUUGUUUGAAUUGUCUCUAGUGAUUCGGAGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT096967.1	ncRNA:20   AAGGGGUUGGUAAGUUCCUU   1   *||=|=*||||||||||||| targets:355   GUCUCUCACCAUUCAAGGAA   374 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-25N8 unknown mRNA	NA	coding protein	psRNATarget
XM_006588944.2	ncRNA:20   AAGGGGUUGGUAAGUUCCUU   1   *||=|=*||||||||||||| targets:433   GUCUCUCACCAUUCAAGGAA   452 Target Full Sequence	3.0	PREDICTED: Glycine max arginine/serine-rich coiled-coil protein 2 (LOC100798812), transcript variant X8, mRNA	arginine/serine-rich coiled-coil protein 2(LOC100798812)	coding protein	psRNATarget
XM_006588943.2	ncRNA:20   AAGGGGUUGGUAAGUUCCUU   1   *||=|=*||||||||||||| targets:434   GUCUCUCACCAUUCAAGGAA   453 Target Full Sequence	3.0	PREDICTED: Glycine max arginine/serine-rich coiled-coil protein 2 (LOC100798812), transcript variant X7, mRNA	arginine/serine-rich coiled-coil protein 2(LOC100798812)	coding protein	psRNATarget
XM_006588942.2	ncRNA:20   AAGGGGUUGGUAAGUUCCUU   1   *||=|=*||||||||||||| targets:318   GUCUCUCACCAUUCAAGGAA   337 Target Full Sequence	3.0	PREDICTED: Glycine max arginine/serine-rich coiled-coil protein 2 (LOC100798812), transcript variant X6, mRNA	arginine/serine-rich coiled-coil protein 2(LOC100798812)	coding protein	psRNATarget
XM_006588941.2	ncRNA:20   AAGGGGUUGGUAAGUUCCUU   1   *||=|=*||||||||||||| targets:421   GUCUCUCACCAUUCAAGGAA   440 Target Full Sequence	3.0	PREDICTED: Glycine max arginine/serine-rich coiled-coil protein 2 (LOC100798812), transcript variant X5, mRNA	arginine/serine-rich coiled-coil protein 2(LOC100798812)	coding protein	psRNATarget
XM_006588940.2	ncRNA:20   AAGGGGUUGGUAAGUUCCUU   1   *||=|=*||||||||||||| targets:427   GUCUCUCACCAUUCAAGGAA   446 Target Full Sequence	3.0	PREDICTED: Glycine max arginine/serine-rich coiled-coil protein 2 (LOC100798812), transcript variant X3, mRNA	arginine/serine-rich coiled-coil protein 2(LOC100798812)	coding protein	psRNATarget
XM_003535864.3	ncRNA:20   AAGGGGUUGGUAAGUUCCUU   1   *||=|=*||||||||||||| targets:431   GUCUCUCACCAUUCAAGGAA   450 Target Full Sequence	3.0	PREDICTED: Glycine max arginine/serine-rich coiled-coil protein 2 (LOC100798812), transcript variant X2, mRNA	arginine/serine-rich coiled-coil protein 2(LOC100798812)	coding protein	psRNATarget
XM_006588939.2	ncRNA:20   AAGGGGUUGGUAAGUUCCUU   1   *||=|=*||||||||||||| targets:432   GUCUCUCACCAUUCAAGGAA   451 Target Full Sequence	3.0	PREDICTED: Glycine max arginine/serine-rich coiled-coil protein 2 (LOC100798812), transcript variant X1, mRNA	arginine/serine-rich coiled-coil protein 2(LOC100798812)	coding protein	psRNATarget
XM_014763091.1	ncRNA:20   AAGGGGUUGGUAAGUUCCUU   1   *||=|=*||||||||||||| targets:439   GUCUCUCACCAUUCAAGGAA   458 Target Full Sequence	3.0	PREDICTED: Glycine max arginine/serine-rich coiled-coil protein 2 (LOC100798812), transcript variant X4, mRNA	arginine/serine-rich coiled-coil protein 2(LOC100798812)	coding protein	psRNATarget