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BaseInfo

ncRNA ID	novel_gma_miR3493
Species	Glycine max
Class	miRNA
Genome position	Chr2:13640523-13640580 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1294485
Length	24
Mature sequence(if miRNA)	35 - GAACGUUCUGGAGAACUCUAGAGU - 58
Stem-loop(if miRNA)	--                 AAA G    A   UCUAGAGUUUUCUAGAA   U UAGA U   |||||||||||||||||   | ||||   AGAUCUCAAGAGGUCUU   A AUCU U UG                 GCA G    U
Stem-loop sequence	UCUAGAGUUUUCUAGAAAAAUGUAGAAUUUUCUAGAACGUUCUGGAGAACUCUAGAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014772135.1	ncRNA:24   UGA--GAUCUCAAGAGGUCUUGCAAG   1   |=|--||||=|||||||||||||||* targets:978   AUUUCCUAGGGUUCUCCAGAACGUUA   1003 Target Full Sequence	2.0	PREDICTED: Glycine max protein arv1 homolog (LOC100813416), transcript variant X4, mRNA	protein arv1 homolog(LOC100813416)	coding protein	psRNATarget
XM_014772134.1	ncRNA:24   UGA--GAUCUCAAGAGGUCUUGCAAG   1   |=|--||||=|||||||||||||||* targets:1002   AUUUCCUAGGGUUCUCCAGAACGUUA   1027 Target Full Sequence	2.0	PREDICTED: Glycine max protein arv1 homolog (LOC100813416), transcript variant X3, mRNA	protein arv1 homolog(LOC100813416)	coding protein	psRNATarget
XM_006604259.2	ncRNA:24   UGA--GAUCUCAAGAGGUCUUGCAAG   1   |=|--||||=|||||||||||||||* targets:1019   AUUUCCUAGGGUUCUCCAGAACGUUA   1044 Target Full Sequence	2.0	PREDICTED: Glycine max protein arv1 homolog (LOC100813416), transcript variant X5, mRNA	protein arv1 homolog(LOC100813416)	coding protein	psRNATarget
XM_003553334.3	ncRNA:24   UGA--GAUCUCAAGAGGUCUUGCAAG   1   |=|--||||=|||||||||||||||* targets:1095   AUUUCCUAGGGUUCUCCAGAACGUUA   1120 Target Full Sequence	2.0	PREDICTED: Glycine max protein arv1 homolog (LOC100813416), transcript variant X1, mRNA	protein arv1 homolog(LOC100813416)	coding protein	psRNATarget
XM_006604258.2	ncRNA:24   UGA--GAUCUCAAGAGGUCUUGCAAG   1   |=|--||||=|||||||||||||||* targets:1111   AUUUCCUAGGGUUCUCCAGAACGUUA   1136 Target Full Sequence	2.0	PREDICTED: Glycine max protein arv1 homolog (LOC100813416), transcript variant X2, mRNA	protein arv1 homolog(LOC100813416)	coding protein	psRNATarget
XM_003546806.3	ncRNA:24   UGAGAUCUCAAGAGGUCUUGCAAG   1   |||-||**|||||||||||||||| targets:1056   ACU-UACCGUUCUCCAGAACGUUC   1078 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100820437 (LOC100820437), mRNA	uncharacterized LOC100820437(LOC100820437)	coding protein	psRNATarget
XM_003531411.3	ncRNA:24   UGAGAUCUCAAGAGGUCUUGCAAG   1   |||-||**|||||||||||||||| targets:1923   ACU-UACCGUUCUCCAGAACGUUC   1945 Target Full Sequence	2.0	PREDICTED: Glycine max ATP-dependent zinc metalloprotease FtsH 2-like (LOC100783574), mRNA	ATP-dependent zinc metalloprotease FtsH 2-like(LOC100783574)	coding protein	psRNATarget