ncRNA ID | novel_gma_miR3492 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:44325547-44325614 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451674 |
Length | 20 |
Mature sequence(if miRNA) | 1 - CAGUCCAUCUUGGCAAAGCU - 20 |
Stem-loop(if miRNA) |
--C       CU     ----      ---AAA    U    AGUCCAU  UGGCA    AAGCUA      ACUC C    |||||||  |||||    ||||||      |||| A    UCAGGUA  AUCGU    UUCGAU      UGGG A CAC       --     AAGU      CGGUAA    U |
Stem-loop sequence | CAGUCCAUCUUGGCAAAGCUAAAAACUCUCAAUGGGUAAUGGCUAGCUUUGAAUGCUAAUGGACUCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT092794.1 |
|
2.5 | Soybean clone JCVI-FLGm-11D2 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001254076.2 |
|
2.5 | Glycine max 40S ribosomal protein S3a-like (LOC100805519), mRNA | 40S ribosomal protein S3a-like(LOC100805519) | coding protein | psRNATarget | |||||||||
BT098700.1 |
|
2.5 | Soybean clone JCVI-FLGm-23I10 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
BT093927.1 |
|
2.5 | Soybean clone JCVI-FLGm-17N24 unknown mRNA | NA | coding protein | psRNATarget |