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BaseInfo

ncRNA ID novel_gma_miR3481
Species Glycine max
Class miRNA
Genome position Chr18:1306109-1306154 [+]
Reference genome Glycine_max_v2.0
Source SRR1451674
Length 20
Mature sequence(if miRNA) 27 - AAAAUAAUUAAGGUCUUUUC - 46
Stem-loop(if miRNA) --       -CCAA       CC
  GAGGACC     UGUUUUU  A
  |||||||     |||||||  G
  UUUCUGG     AUAAAAA  U
CU       AAUUA       AU
Stem-loop sequence GAGGACCCCAAUGUUUUUCCAGUUAAAAAAUAAUUAAGGUCUUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT099403.1
ncRNA:20   CUUUUCUGGAAUUAAUAAAA   1
  *||||*||||||||||||||
targets:383   AAAAACACCUUAAUUAUUUU   402

1.0 Soybean clone JCVI-FLGm-26N18 unknown mRNA NA coding protein psRNATarget
XM_003521570.3
ncRNA:20   CUUUUCUGGAAUUAAUAAAA   1
  *|||||||||||||||*||*
targets:496   CAAAAGACCUUAAUUAAUUA   515

2.5 PREDICTED: Glycine max AT-hook motif nuclear-localized protein 22-like (LOC100816243), mRNA AT-hook motif nuclear-localized protein 22-like(LOC100816243) coding protein psRNATarget