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BaseInfo

ncRNA ID	novel_gma_miR3475
Species	Glycine max
Class	miRNA
Genome position	Chr18:18903988-18904074 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	1 - UGCUUUUUUGAGAGAAAAAC - 20
Stem-loop(if miRNA)	---      -  CU    U   -AACA        -  AAGA  CA    UUUCUC CA  AAAA GCA     UGCUUUAG CA    GA  A    |||||| ||  |||| |||     |||||||| ||    ||  A    AAAGAG GU  UUUU CGU     ACGAGAUU GU    CU  U CAA      A  -U    -   AUACG        A  CAAC  UA
Stem-loop sequence	UUUCUCCACUAAAAUGCAAACAUGCUUUAGCAAAGAGACAAAUAUUCCAACUGAUUAGAGCAGCAUAUGCUUUUUUGAGAGAAAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003556119.3	ncRNA:20   CAAAAAGAGAGUUUUUUCGU   1   |*||||*||||||||||||| targets:1667   GAUUUUAUCUCAAAAAAGCA   1686 Target Full Sequence	2.0	PREDICTED: Glycine max type IV inositol polyphosphate 5-phosphatase 3-like (LOC100780455), transcript variant X1, mRNA	type IV inositol polyphosphate 5-phosphatase 3-like(LOC100780455)	coding protein	psRNATarget
XM_014773005.1	ncRNA:20   CAAAAAGAGAGUUUUUUCGU   1   |*||||*||||||||||||| targets:1685   GAUUUUAUCUCAAAAAAGCA   1704 Target Full Sequence	2.0	PREDICTED: Glycine max type IV inositol polyphosphate 5-phosphatase 3-like (LOC100780455), transcript variant X2, mRNA	type IV inositol polyphosphate 5-phosphatase 3-like(LOC100780455)	coding protein	psRNATarget
XM_006606118.2	ncRNA:20   CAAAAAGAGAGUUUUUUCGU   1   |*||||*||||||||||||| targets:1790   GAUUUUAUCUCAAAAAAGCA   1809 Target Full Sequence	2.0	PREDICTED: Glycine max type IV inositol polyphosphate 5-phosphatase 3-like (LOC100780455), transcript variant X3, mRNA	type IV inositol polyphosphate 5-phosphatase 3-like(LOC100780455)	coding protein	psRNATarget
BT098048.1	ncRNA:20   CAAAAAGAGAGUUUUUUCGU   1   *|||||=|=||||||||||| targets:18   UUUUUUUUUUCAAAAAAGCA   37 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-22J10 unknown mRNA	NA	coding protein	psRNATarget