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BaseInfo

ncRNA ID	novel_gma_miR3465
Species	Glycine max
Class	miRNA
Genome position	Chr17:20862785-20862924 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	1 - GAAGCAAUAUUUGGCUGAGC - 20
Stem-loop(if miRNA)	--  A       UU   ---UG     --A   ACUGACAGAGGUUAAAGGUGAUGAACAAAUGCUUAGGGA   GA GCAAUAU  GGC     AGCUU   CUG                                       A   || |||||||  |||     |||||   |||                                       A   CU CGUUAUG  CUG     UUCCG   CUU                                       U UU  G       UU   CGUUC     UAU   CAACGUCUCUCUUCUUUUACUAAACUUGGGCACCUGGGG
Stem-loop sequence	GAAGCAAUAUUUGGCUGAGCUUACUGACUGACAGAGGUUAAAGGUGAUGAACAAAUGCUUAGGGAAAUGGGGUCCACGGGUUCAAAUCAUUUUCUUCUCUCUGCAACUUCUAUGCCUUCUUGCGUCUUGUAUUGCGUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003552782.3	ncRNA:20   CGAGUCGGUUUAUAACGAAG   1   *||*||||||||||||*||| targets:5260   CCUGAGCCAAAUAUUGAUUC   5279 Target Full Sequence	2.5	PREDICTED: Glycine max ARF guanine-nucleotide exchange factor GNOM-like (LOC100780239), transcript variant X2, mRNA	ARF guanine-nucleotide exchange factor GNOM-like(LOC100780239)	coding protein	psRNATarget
XM_006601927.2	ncRNA:20   CGAGUCGGUUUAUAACGAAG   1   *||*||||||||||||*||| targets:5263   CCUGAGCCAAAUAUUGAUUC   5282 Target Full Sequence	2.5	PREDICTED: Glycine max ARF guanine-nucleotide exchange factor GNOM-like (LOC100780239), transcript variant X1, mRNA	ARF guanine-nucleotide exchange factor GNOM-like(LOC100780239)	coding protein	psRNATarget
BT095833.1	ncRNA:20   CGAGUCGGUUUAUAACGAAG   1   *||=|*|||||||||||||* targets:147   ACUUAUCCAAAUAUUGCUUG   166 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-19P10 unknown mRNA	NA	coding protein	psRNATarget
NM_001254207.1	ncRNA:20   CGAGUCGGUUUAUAACGAAG   1   *||=|*|||||||||||||* targets:147   ACUUAUCCAAAUAUUGCUUG   166 Target Full Sequence	3.0	Glycine max peptide methionine sulfoxide reductase-like (LOC100792997), mRNA	peptide methionine sulfoxide reductase-like(LOC100792997)	coding protein	psRNATarget
XM_006601747.2	ncRNA:20   CGAGUCGGUUUAUAACGAAG   1   *||=|*|||||||||||||* targets:349   ACUUAUCCAAAUAUUGCUUG   368 Target Full Sequence	3.0	PREDICTED: Glycine max peptide methionine sulfoxide reductase-like (LOC100792997), transcript variant X5, mRNA	peptide methionine sulfoxide reductase-like(LOC100792997)	coding protein	psRNATarget
XM_006601744.2	ncRNA:20   CGAGUCGGUUUAUAACGAAG   1   *||=|*|||||||||||||* targets:443   ACUUAUCCAAAUAUUGCUUG   462 Target Full Sequence	3.0	PREDICTED: Glycine max peptide methionine sulfoxide reductase-like (LOC100792997), transcript variant X1, mRNA	peptide methionine sulfoxide reductase-like(LOC100792997)	coding protein	psRNATarget
XM_006601746.2	ncRNA:20   CGAGUCGGUUUAUAACGAAG   1   *||=|*|||||||||||||* targets:598   ACUUAUCCAAAUAUUGCUUG   617 Target Full Sequence	3.0	PREDICTED: Glycine max peptide methionine sulfoxide reductase-like (LOC100792997), transcript variant X4, mRNA	peptide methionine sulfoxide reductase-like(LOC100792997)	coding protein	psRNATarget
XM_014770216.1	ncRNA:20   CGAGUCGGUUUAUAACGAAG   1   *||=|*|||||||||||||* targets:629   ACUUAUCCAAAUAUUGCUUG   648 Target Full Sequence	3.0	PREDICTED: Glycine max peptide methionine sulfoxide reductase-like (LOC100792997), transcript variant X3, mRNA	peptide methionine sulfoxide reductase-like(LOC100792997)	coding protein	psRNATarget
XM_014770215.1	ncRNA:20   CGAGUCGGUUUAUAACGAAG   1   *||=|*|||||||||||||* targets:658   ACUUAUCCAAAUAUUGCUUG   677 Target Full Sequence	3.0	PREDICTED: Glycine max peptide methionine sulfoxide reductase-like (LOC100792997), transcript variant X2, mRNA	peptide methionine sulfoxide reductase-like(LOC100792997)	coding protein	psRNATarget