ncRNA ID | novel_gma_miR3464 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:15970042-15970109 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451674 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UAGACGGUCUUGUUUGAACC - 20 |
Stem-loop(if miRNA) |
-----------UAGA   U      UG  CCG      C                CGG CUUGUU  AA   AGAUGA U                ||| ||||||  ||   |||||| U                GUU GAACAG  UU   UUUAUU U GAAGAUGUAGUAUAA   U      GU  --A      A |
Stem-loop sequence | UAGACGGUCUUGUUUGAACCGAGAUGACUUUAUUAUUUAUUUGGACAAGUUUGAAUAUGAUGUAGAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003548070.3 |
|
2.5 | PREDICTED: Glycine max surfeit locus protein 2 (LOC100806918), mRNA | surfeit locus protein 2(LOC100806918) | coding protein | psRNATarget | |||||||||
XM_006592765.2 |
|
2.5 | PREDICTED: Glycine max G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 (LOC100807714), transcript variant X1, mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230(LOC100807714) | coding protein | psRNATarget |