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BaseInfo

ncRNA ID novel_gma_miR3457
Species Glycine max
Class miRNA
Genome position Chr4:24903201-24903248 [-]
Reference genome Glycine_max_v2.0
Source DRR031984;SRR1753107;SRR3160566;SRR3160568;SRR3160569;SRR1451604;SRR1451605;SRR1451606;SRR1451607;SRR1451608;SRR1451609;SRR1451615;SRR1451616;SRR1451617;SRR1451622;SRR1451623
Length 22
Mature sequence(if miRNA) 27 - UCGAGAAUAGGUUGUUGCAUUC - 48
Stem-loop(if miRNA) --    GA    -     U   UUC
  UCGA  AUAG GUUGU GCA   C
  ||||  |||| ||||| |||
  GGCU  UAUC CAACG UGU   A
UG    -A    A     U   UAA
Stem-loop sequence UCGAGAAUAGGUUGUUGCAUUCCAAAUUGUUGCAACACUAUAUCGGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006586974.2
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  |||||||||||||||||||||=
targets:130   GAAUGCAACAACCUAUUCUCGG   151

1.0 PREDICTED: Glycine max uncharacterized LOC102667070 (LOC102667070), mRNA uncharacterized LOC102667070(LOC102667070) coding protein psRNATarget
XM_014775135.1
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  |=||||||||||||||||*|||
targets:557   GGAUGCAACAACCUAUUCCCGA   578

1.5 PREDICTED: Glycine max uncharacterized LOC106798535 (LOC106798535), mRNA uncharacterized LOC106798535(LOC106798535) coding protein psRNATarget
XM_014762493.1
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  |||||||||||||||||||*|=
targets:1010   GAAUGCAACAACCUAUUCUGGG   1031

2.5 PREDICTED: Glycine max uncharacterized LOC102668704 (LOC102668704), mRNA uncharacterized LOC102668704(LOC102668704) coding protein psRNATarget
XM_006597622.2
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  *|||||||||||||||||*||=
targets:239   AAAUGCAACAACCUAUUCCCGG   260

2.5 PREDICTED: Glycine max uncharacterized LOC102661700 (LOC102661700), mRNA uncharacterized LOC102661700(LOC102661700) coding protein psRNATarget
XM_014777154.1
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:186   GAUUGCAACAACCUAUUCCCGG   207

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102663698), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102663698) coding protein psRNATarget
XM_006588162.1
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:187   GAUUGCAACAACCUAUUCCCGG   208

2.5 PREDICTED: Glycine max uncharacterized LOC102666398 (LOC102666398), mRNA uncharacterized LOC102666398(LOC102666398) coding protein psRNATarget
XM_014772114.1
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:737   GAUUGCAACAACCUAUUCCCGG   758

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106797518), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106797518) coding protein psRNATarget
XM_014775613.1
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:137   GAUUGCAACAACCUAUUCCCGG   158

2.5 PREDICTED: Glycine max uncharacterized LOC102668151 (LOC102668151), mRNA uncharacterized LOC102668151(LOC102668151) coding protein psRNATarget
XM_014775514.1
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:301   GAUUGCAACAACCUAUUCCCGG   322

2.5 PREDICTED: Glycine max uncharacterized LOC106798711 (LOC106798711), mRNA uncharacterized LOC106798711(LOC106798711) coding protein psRNATarget
XM_014762462.1
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:232   GAUUGCAACAACCUAUUCCCGG   253

2.5 PREDICTED: Glycine max uncharacterized LOC106794691 (LOC106794691), mRNA uncharacterized LOC106794691(LOC106794691) coding protein psRNATarget
XM_014772280.1
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:734   GAUUGCAACAACCUAUUCCCGG   755

2.5 PREDICTED: Glycine max uncharacterized LOC106797540 (LOC106797540), mRNA uncharacterized LOC106797540(LOC106797540) coding protein psRNATarget
XM_014776675.1
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:1653   GAUUGCAACAACCUAUUCCCGG   1674

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC100790217), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC100790217) coding protein psRNATarget
XM_006600889.2
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:1097   GAUUGCAACAACCUAUUCCCGG   1118

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102666222), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102666222) coding protein psRNATarget
XM_006579970.2
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:1277   GAUUGCAACAACCUAUUCCCGG   1298

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC100782801), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC100782801) coding protein psRNATarget
XM_014766295.1
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:1086   GAUUGCAACAACCUAUUCCCGG   1107

2.5 PREDICTED: Glycine max uncharacterized LOC106794312 (LOC106794312), mRNA uncharacterized LOC106794312(LOC106794312) coding protein psRNATarget
XM_014771675.1
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:1653   GAUUGCAACAACCUAUUCCCGG   1674

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106794141), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106794141) coding protein psRNATarget
XM_006594783.2
ncRNA:22   CUUACGUUGUUGGAUAAGAGCU   1
  ||*|||||||||||||||*||=
targets:1635   GAUUGCAACAACCUAUUCCCGG   1656

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102670395), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102670395) coding protein psRNATarget
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