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BaseInfo

ncRNA ID	novel_gma_miR3447
Species	Glycine max
Class	miRNA
Genome position	Chr16:2556020-2556074 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	21
Mature sequence(if miRNA)	1 - AUUUUGAAAUGAAAGAAAAGU - 21
Stem-loop(if miRNA)	--A                 ----    U    UUUUUUUCAUUUCAAAA    AAUU A    |||||||||||||||||    |||| U    AAAGAAAGUAAAGUUUU    UUAA A UGA                 AACU    U
Stem-loop sequence	AUUUUUUUCAUUUCAAAAAAUUUAUAUAAUUUCAAUUUUGAAAUGAAAGAAAAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003554035.3	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   **|||||||*||||||||||| targets:1728   UAUUUUCUUCCAUUUCAAAAU   1748 Target Full Sequence	1.5	PREDICTED: Glycine max UBP1-associated protein 2A-like (LOC100784200), transcript variant X1, mRNA	UBP1-associated protein 2A-like(LOC100784200)	coding protein	psRNATarget
AK287123.1	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   **|||||||*||||||||||| targets:1720   UAUUUUCUUCCAUUUCAAAAU   1740 Target Full Sequence	1.5	Glycine max cDNA, clone: GMFL01-44-J10	NA	coding protein	psRNATarget
XM_006583067.2	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *|||||=*||||||||||||| targets:2012   UCUUUUUGUUCAUUUCAAAAU   2032 Target Full Sequence	2.0	PREDICTED: Glycine max WD repeat-containing protein 43-like (LOC100792757), transcript variant X1, mRNA	WD repeat-containing protein 43-like(LOC100792757)	coding protein	psRNATarget
XM_003529766.3	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *|||||=*||||||||||||| targets:2009   UCUUUUUGUUCAUUUCAAAAU   2029 Target Full Sequence	2.0	PREDICTED: Glycine max WD repeat-containing protein 43-like (LOC100792757), transcript variant X2, mRNA	WD repeat-containing protein 43-like(LOC100792757)	coding protein	psRNATarget
XM_006583069.2	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *|||||=*||||||||||||| targets:1907   UCUUUUUGUUCAUUUCAAAAU   1927 Target Full Sequence	2.0	PREDICTED: Glycine max WD repeat-containing protein 43-like (LOC100792757), transcript variant X3, mRNA	WD repeat-containing protein 43-like(LOC100792757)	coding protein	psRNATarget
BT094355.1	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *|**||||||||||||||||| targets:32   CCAAUUCUUUCAUUUCAAAAU   52 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-18F9 unknown mRNA	NA	coding protein	psRNATarget
XM_006573090.2	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   |=||||=||||*||||||||| targets:1700   AUUUUUUUUUCUUUUCAAAAU   1720 Target Full Sequence	2.5	PREDICTED: Glycine max protein root UVB sensitive 3 (LOC100815127), mRNA	protein root UVB sensitive 3(LOC100815127)	coding protein	psRNATarget
BT090038.1	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *|||||=||||*||||||||| targets:123   CCUUUUUUUUCCUUUCAAAAU   143 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-3O22 unknown mRNA	NA	coding protein	psRNATarget
NM_001250789.2	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *|||||=||||*||||||||| targets:121   CCUUUUUUUUCCUUUCAAAAU   141 Target Full Sequence	2.5	Glycine max uncharacterized LOC100499904 (LOC100499904), mRNA	uncharacterized LOC100499904(LOC100499904)	coding protein	psRNATarget
XM_014762490.1	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *=||||=||||*||||||||| targets:4004   UUUUUUUUUUCUUUUCAAAAU   4024 Target Full Sequence	2.5	PREDICTED: Glycine max myosin-1 (LOC100796845), transcript variant X2, mRNA	myosin-1(LOC100796845)	coding protein	psRNATarget
XM_006587903.2	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *=||||=||||*||||||||| targets:3888   UUUUUUUUUUCUUUUCAAAAU   3908 Target Full Sequence	2.5	PREDICTED: Glycine max myosin-1 (LOC100796845), transcript variant X1, mRNA	myosin-1(LOC100796845)	coding protein	psRNATarget
XM_003539477.3	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *=||||=||||*||||||||| targets:2204   UUUUUUUUUUCUUUUCAAAAU   2224 Target Full Sequence	2.5	PREDICTED: Glycine max probable indole-3-acetic acid-amido synthetase GH3.5 (LOC100814683), transcript variant X1, mRNA	probable indole-3-acetic acid-amido synthetase GH3.5(LOC100814683)	coding protein	psRNATarget
XM_006592772.2	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *=||||=||||*||||||||| targets:1842   UUUUUUUUUUCUUUUCAAAAU   1862 Target Full Sequence	2.5	PREDICTED: Glycine max probable indole-3-acetic acid-amido synthetase GH3.5 (LOC100814683), transcript variant X2, mRNA	probable indole-3-acetic acid-amido synthetase GH3.5(LOC100814683)	coding protein	psRNATarget
XM_006597013.2	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   **|||||*|||=||||||||| targets:47   CGUUUUCCUUCGUUUCAAAAU   67 Target Full Sequence	2.5	PREDICTED: Glycine max histone acetyltransferase HAC1-like (LOC100800511), transcript variant X1, mRNA	histone acetyltransferase HAC1-like(LOC100800511)	coding protein	psRNATarget
XM_003526901.3	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   **||||=||||*||||||||| targets:1680   UAUUUUUUUUCUUUUCAAAAU   1700 Target Full Sequence	2.5	PREDICTED: Glycine max F-box/LRR-repeat protein At5g63520-like (LOC100815778), mRNA	F-box/LRR-repeat protein At5g63520-like(LOC100815778)	coding protein	psRNATarget
XM_006590291.2	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *=||||||||*|||||||||* targets:951   UUUUUUCUUUAAUUUCAAAAA   971 Target Full Sequence	2.5	PREDICTED: Glycine max glyoxalase I (GLXI), transcript variant X1, mRNA	glyoxalase I(GLXI)	coding protein	psRNATarget
AJ010423.1	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *=||||||||*|||||||||* targets:805   UUUUUUCUUUAAUUUCAAAAA   825 Target Full Sequence	2.5	Glycine max mRNA for glyoxalase I	NA	coding protein	psRNATarget
NM_001249223.1	ncRNA:21   UGAAAAGAAAGUAAAGUUUUA   1   *=||||||||*|||||||||* targets:805   UUUUUUCUUUAAUUUCAAAAA   825 Target Full Sequence	2.5	Glycine max glyoxalase I (GLXI), mRNA	glyoxalase I(GLXI)	coding protein	psRNATarget
BT096315.1	ncRNA:21   UGA-AAAGAAAGUAAAGUUUUA   1   *||-|||||||||||||||||* targets:5   UCUCUUUCUUUCAUUUCAAAAA   26 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-15B9 unknown mRNA	NA	coding protein	psRNATarget