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BaseInfo

ncRNA ID novel_gma_miR3443
Species Glycine max
Class miRNA
Genome position Chr16:25439414-25439524 [-]
Reference genome Glycine_max_v2.0
Source SRR1451674
Length 21
Mature sequence(if miRNA) 91 - CCUACAAAGAACUCCGAAAUC - 111
Stem-loop(if miRNA) ------------   A        -------UC     - CAAUUUAUUUUGUAGCUUUUUUGAA
            CCU CAAAGAAC         CGAAA U                         U
            ||| ||||||||         ||||| |
            GGG GUUUCUUG         AAAAU U                         C
GUGGUUUUUUUA   -        UUUCCAAUC     A AGGUGGUAACGUCCGUCGGUUCCGU
Stem-loop sequence CCUACAAAGAACUCCGAAAUCAAUUUAUUUUGUAGCUUUUUUGAAUCUGCCUUGGCUGCCUGCAAUGGUGGAUAUAAAACUAACCUUUGUUCUUUGGGGAUUUUUUUGGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001253119.2
ncRNA:21   CUAAAGCCUCAAGAAACAUCC   1
  **||||**|||||||||||||
targets:1259   AUUUUCCUAGUUCUUUGUAGG   1279

2.0 Glycine max transcription factor ASG4-like (LOC100783949), mRNA transcription factor ASG4-like(LOC100783949) coding protein psRNATarget
BT093234.1
ncRNA:21   CUAAAGCCUCAAGAAACAUCC   1
  **||||**|||||||||||||
targets:1261   AUUUUCCUAGUUCUUUGUAGG   1281

2.0 Soybean clone JCVI-FLGm-17C23 unknown mRNA NA coding protein psRNATarget