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BaseInfo

ncRNA ID novel_gma_miR3439
Species Glycine max
Class miRNA
Genome position Chr11:31118765-31118838 [+]
Reference genome Glycine_max_v2.0
Source SRR1294485;SRR2045231;SRR1295519;SRR1292928;SRR1451616;SRR1451620
Length 24
Mature sequence(if miRNA) 51 - ACCCGCGGAAGAUCCUGCAGAACC - 74
Stem-loop(if miRNA) --                   U A   A        AC
  UUCUGCAGGAUCUUCCGCG G UCC GUGGAAGA  G
  ||||||||||||||||||| | ||| ||||||||
  AAGACGUCCUAGAAGGCGC C AGG CGCUUUCU  U
CC                   - C   -        GU
Stem-loop sequence UUCUGCAGGAUCUUCCGCGUGAUCCAGUGGAAGAACGUUGUCUUUCGCGGACCCGCGGAAGAUCCUGCAGAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006574210.1
ncRNA:24   CCAAGACGUCCUAGAAGGCGCCCA   1
  |*|||||||||||||||||||*|*
targets:173   GCUUCUGCAGGAUCUUCCGCGUGA   196

2.5 PREDICTED: Glycine max uncharacterized LOC102668039 (LOC102668039), mRNA uncharacterized LOC102668039(LOC102668039) coding protein psRNATarget
XM_006575771.1
ncRNA:24   CCAAGACGUCCUAGAAGGCGCCCA   1
  |*|||||||||||||||||||*|*
targets:48   GAUUCUGCAGGAUCUUCCGCGUGA   71

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102663234), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102663234) coding protein psRNATarget