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BaseInfo

ncRNA ID novel_gma_miR3428
Species Glycine max
Class miRNA
Genome position Chr15:49073000-49073046 [-]
Reference genome Glycine_max_v2.0
Source SRR1451674
Length 21
Mature sequence(if miRNA) 1 - CCAGACUUUAUCAUUGCAUUG - 21
Stem-loop(if miRNA) --    -U           CAA  U
  AUGU  UGGUGGAGUUU   GA U
  ||||  |||||||||||   ||
  UACG  ACUAUUUCAGA   CU G
GU    UU           --C  U
Stem-loop sequence AUGUUUGGUGGAGUUUCAAGAUUGUUCCAGACUUUAUCAUUGCAUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT093896.1
ncRNA:21   GUUACGUUACUAUUUCAGACC   1
  **||||||||||||||*|||*
targets:508   AUAUGCAAUGAUAAAGGCUGC   528

2.5 Soybean clone JCVI-FLGm-24B15 unknown mRNA NA coding protein psRNATarget
AK243972.1
ncRNA:21   GUUACGUUACUAUUUCAGACC   1
  **||||||||||||||*|||*
targets:1106   AUAUGCAAUGAUAAAGGCUGC   1126

2.5 Glycine max cDNA, clone: GMFL01-01-M02 NA coding protein psRNATarget
NM_001251808.1
ncRNA:21   GUUACGUUACUAUUUCAGACC   1
  **||||||||||||||*|||*
targets:1097   AUAUGCAAUGAUAAAGGCUGC   1117

2.5 Glycine max aminolevulinate, delta-, dehydratase (HEMB), mRNA aminolevulinate, delta-, dehydratase(HEMB) coding protein psRNATarget
U04525.1
ncRNA:21   GUUACGUUACUAUUUCAGACC   1
  **||||||||||||||*|||*
targets:1097   AUAUGCAAUGAUAAAGGCUGC   1117

2.5 Glycine max delta-aminolevulinic acid dehydratase (Alad) mRNA, complete cds NA coding protein psRNATarget
NM_001251808.2
ncRNA:21   GUUACGUUACUAUUUCAGACC   1
  **||||||||||||||*|||*
targets:1251   AUAUGCAAUGAUAAAGGCUGC   1271

2.5 Glycine max aminolevulinate, delta-, dehydratase (HEMB), mRNA aminolevulinate, delta-, dehydratase(HEMB) coding protein psRNATarget
AK285742.1
ncRNA:21   GUUACGUUACUAUUUCAGACC   1
  **||||||||||||||*|||*
targets:1531   AUAUGCAAUGAUAAAGGCUGC   1551

2.5 Glycine max cDNA, clone: GMFL01-15-J07 NA coding protein psRNATarget