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BaseInfo

ncRNA ID novel_gma_miR3427
Species Glycine max
Class miRNA
Genome position Chr15:50301254-50301318 [+]
Reference genome Glycine_max_v2.0
Source SRR1451674
Length 20
Mature sequence(if miRNA) 1 - UUUGGGGAAGAGGUGACACU - 20
Stem-loop(if miRNA) --UU   GG     GUG  -A     U    UA
    UGG  AAGAG   AC  CUUUG ACAG  U
    |||  |||||   ||  ||||| ||||  A
    ACC  UUUUU   UG  GAAAC UGUU  U
GGAU   UA     AUA  AA     -    CU
Stem-loop sequence UUUGGGGAAGAGGUGACACUUUGUACAGUAUAUUCUUGUCAAAGAAGUAUAUUUUUAUCCAUAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003545903.3
ncRNA:20   UCACAGUGGAGAAGGGGUUU   1
  ||||||||||||||||||||
targets:1823   AGUGUCACCUCUUCCCCAAA   1842

0.0 PREDICTED: Glycine max serine/threonine-protein kinase RHS3-like (LOC100819001), mRNA serine/threonine-protein kinase RHS3-like(LOC100819001) coding protein psRNATarget