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BaseInfo

ncRNA ID novel_gma_miR3425
Species Glycine max
Class miRNA
Genome position Chr15:41145506-41145575 [+]
Reference genome Glycine_max_v2.0
Source SRR1451674
Length 20
Mature sequence(if miRNA) 1 - AAAGGAAAAGUGGAGCCGAG - 20
Stem-loop(if miRNA) --A   -    A -     CC      -- UG   AAU
   AAG GAAA G UGGAG  GAGGUG  C  CAG   U
   ||| |||| | |||||  ||||||  |  |||
   UUC CUUU C GCUUC  CUUCAC  G  GUC   C
UUG   U    A U     --      UA GU   AGC
Stem-loop sequence AAAGGAAAAGUGGAGCCGAGGUGCUGCAGAAUUCCGACUGUGGAUCACUUCCUUCGUCAUUUCUCUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006580420.2
ncRNA:20   GAGCCGAGGUGAAAAGGAAA   1
  |*|||||=||||||||||||
targets:202   CGCGGCUUCACUUUUCCUUU   221

2.5 PREDICTED: Glycine max glucan endo-1,3-beta-glucosidase 13 (LOC100794295), mRNA glucan endo-1,3-beta-glucosidase 13(LOC100794295) coding protein psRNATarget
BT099099.1
ncRNA:20   GAGCCGAGGUGAAAAGGAAA   1
  |*|||||=||||||||||||
targets:30   CGCGGCUUCACUUUUCCUUU   49

2.5 Soybean clone JCVI-FLGm-26F20 unknown mRNA NA coding protein psRNATarget
XM_006596751.1
ncRNA:20   GAGCCGAGGUGAAAAGGA-AA   1
  ||||||||||||||||||-||
targets:41   CUCGGCUCCACUUUUCCUCUU   61

3.0 PREDICTED: Glycine max uncharacterized LOC102660473 (LOC102660473), mRNA uncharacterized LOC102660473(LOC102660473) coding protein psRNATarget