ncRNA ID | novel_gma_miR3425 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:41145506-41145575 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451674 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AAAGGAAAAGUGGAGCCGAG - 20 |
Stem-loop(if miRNA) |
--A   -    A -     CC      -- UG   AAU    AAG GAAA G UGGAG  GAGGUG  C  CAG   U    ||| |||| | |||||  ||||||  |  |||    UUC CUUU C GCUUC  CUUCAC  G  GUC   C UUG   U    A U     --      UA GU   AGC |
Stem-loop sequence | AAAGGAAAAGUGGAGCCGAGGUGCUGCAGAAUUCCGACUGUGGAUCACUUCCUUCGUCAUUUCUCUUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006580420.2 |
|
2.5 | PREDICTED: Glycine max glucan endo-1,3-beta-glucosidase 13 (LOC100794295), mRNA | glucan endo-1,3-beta-glucosidase 13(LOC100794295) | coding protein | psRNATarget | |||||||||
BT099099.1 |
|
2.5 | Soybean clone JCVI-FLGm-26F20 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_006596751.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102660473 (LOC102660473), mRNA | uncharacterized LOC102660473(LOC102660473) | coding protein | psRNATarget |