ncRNA ID | novel_gma_miR3420 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:5470745-5470849 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451674 |
Length | 20 |
Mature sequence(if miRNA) | 86 - AUUUUAUUUUCUCGGAUCUG - 105 |
Stem-loop(if miRNA) |
--A       U     ---     -GG     UAAUUA   AA    UU       A    UUUUAUU UCUCG   GAUCU   UUUGC      GUU  CGUG  UUUAUAU U    ||||||| |||||   |||||   |||||      |||  ||||  |||||||    GAAGUGA AGAGC   UUGGA   GAACG      UAG  GCGU  GGAUAUA A AAG       U     ACA     GAG     ----UG   CA    -U       U |
Stem-loop sequence | AUUUUAUUUUCUCGGAUCUGGUUUGCUAAUUAGUUAACGUGUUUUUAUAUAUAUAUAUAGGUUGCGACGAUGUGCAAGGAGAGGUUACACGAGAUAGUGAAGGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003549568.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100780551 (LOC100780551), mRNA | uncharacterized LOC100780551(LOC100780551) | coding protein | psRNATarget |