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BaseInfo

ncRNA ID novel_gma_miR3420
Species Glycine max
Class miRNA
Genome position Chr14:5470745-5470849 [-]
Reference genome Glycine_max_v2.0
Source SRR1451674
Length 20
Mature sequence(if miRNA) 86 - AUUUUAUUUUCUCGGAUCUG - 105
Stem-loop(if miRNA) --A       U     ---     -GG     UAAUUA   AA    UU       A
   UUUUAUU UCUCG   GAUCU   UUUGC      GUU  CGUG  UUUAUAU U
   ||||||| |||||   |||||   |||||      |||  ||||  |||||||
   GAAGUGA AGAGC   UUGGA   GAACG      UAG  GCGU  GGAUAUA A
AAG       U     ACA     GAG     ----UG   CA    -U       U
Stem-loop sequence AUUUUAUUUUCUCGGAUCUGGUUUGCUAAUUAGUUAACGUGUUUUUAUAUAUAUAUAUAGGUUGCGACGAUGUGCAAGGAGAGGUUACACGAGAUAGUGAAGGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003549568.3
ncRNA:20   GUCUAGGCUCUUUUAUUUUA   1
  ||||*||||*||||||||||
targets:1151   CAGAGCCGAAAAAAUAAAAU   1170

2.5 PREDICTED: Glycine max uncharacterized LOC100780551 (LOC100780551), mRNA uncharacterized LOC100780551(LOC100780551) coding protein psRNATarget