Search result

BaseInfo

ncRNA ID	novel_gma_miR3412
Species	Glycine max
Class	miRNA
Genome position	Chr10:41700943-41701009 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	48 - CAGUCCAUCUUGGCAAAGCU - 67
Stem-loop(if miRNA)	--C       CU     ----      A ---A    U    AGUCCAU  UGGCA    AAGCUA A    ACUC A    |||||||  |||||    |||||| |    ||||    UCAGGUA  AUCGU    UUCGAU U    UGGG A CAC       --     AAGU      C GUAA    U
Stem-loop sequence	CAGUCCAUCUUGGCAAAGCUAAAAACUCUAAUGGGUAAUGUCUAGCUUUGAAUGCUAAUGGACUCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT092794.1	ncRNA:20   UCGAAACGGUUCUACCUGAC   1   **|||||||||||*|||||| targets:124   CCCUUUGCCAAGAAGGACUG   143 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-11D2 unknown mRNA	NA	coding protein	psRNATarget
NM_001254076.2	ncRNA:20   UCGAAACGGUUCUACCUGAC   1   **|||||||||||*|||||| targets:126   CCCUUUGCCAAGAAGGACUG   145 Target Full Sequence	2.5	Glycine max 40S ribosomal protein S3a-like (LOC100805519), mRNA	40S ribosomal protein S3a-like(LOC100805519)	coding protein	psRNATarget
BT098700.1	ncRNA:20   UCGAAACGGUUCUACCUGAC   1   **|||||||||||*|||||| targets:128   CCCUUUGCCAAGAAGGACUG   147 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-23I10 unknown mRNA	NA	coding protein	psRNATarget
BT093927.1	ncRNA:20   UCGAAACGGUUCUACCUGAC   1   **|||||||||||*|||||| targets:205   CCCUUUGCCAAGAAGGACUG   224 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-17N24 unknown mRNA	NA	coding protein	psRNATarget