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BaseInfo

ncRNA ID	novel_gma_miR3406
Species	Glycine max
Class	miRNA
Genome position	Chr12:36220826-36220917 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	73 - GACUAAAAACACUUAUUUUU - 92
Stem-loop(if miRNA)	--    U             U             ------U  UG A G   AAAU GGUGUUUUUAGUC CUUAGGACAGAUG       CA  U G A   |||| ||||||||||||| |||||||||||||       ||  | |   UUUA UCACAAAAAUCAG GAAUUCUGUCUAU       GU  G C A UU    U             C             GAUAAUU  GU G A
Stem-loop sequence	AAAUUGGUGUUUUUAGUCUCUUAGGACAGAUGUCAUGUAGGAAACGGUGUGUUAAUAGUAUCUGUCUUAAGCGACUAAAAACACUUAUUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014762931.1	ncRNA:20   UUUUUAUUCACAAAAAUCAG   1   |||*|||||||||||||||= targets:2962   AAACAUAAGUGUUUUUAGUU   2981 Target Full Sequence	2.0	PREDICTED: Glycine max myosin-binding protein 1-like (LOC102660057), transcript variant X1, mRNA	myosin-binding protein 1-like(LOC102660057)	coding protein	psRNATarget
XM_006588600.2	ncRNA:20   UUUUUAUUCACAAAAAUCAG   1   |||*|||||||||||||||= targets:3013   AAACAUAAGUGUUUUUAGUU   3032 Target Full Sequence	2.0	PREDICTED: Glycine max myosin-binding protein 1-like (LOC102660057), transcript variant X2, mRNA	myosin-binding protein 1-like(LOC102660057)	coding protein	psRNATarget
AK243925.1	ncRNA:20   UUUUUAUUCACAAAAAUCAG   1   =|||||||||||*||||||* targets:1926   GAAAAUAAGUGUAUUUAGUA   1945 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-01-K02	NA	coding protein	psRNATarget
XM_003540797.3	ncRNA:20   UUUUUAUUCACAAAAAUCAG   1   =|||||||||||*||||||* targets:2013   GAAAAUAAGUGUAUUUAGUA   2032 Target Full Sequence	2.5	PREDICTED: Glycine max protein NUCLEAR FUSION DEFECTIVE 4 (LOC100807372), mRNA	protein NUCLEAR FUSION DEFECTIVE 4(LOC100807372)	coding protein	psRNATarget
XM_006589494.2	ncRNA:20   UUUUUAUUCACAAAAAUCAG   1   |||||*|||||*|||||||| targets:345   AAAAACAAGUGGUUUUAGUC   364 Target Full Sequence	2.5	PREDICTED: Glycine max homeobox-leucine zipper protein ANTHOCYANINLESS 2-like (LOC100794400), transcript variant X1, mRNA	homeobox-leucine zipper protein ANTHOCYANINLESS 2-like(LOC100794400)	coding protein	psRNATarget