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BaseInfo

ncRNA ID	novel_gma_miR3404
Species	Glycine max
Class	miRNA
Genome position	Chr1:925219-925302 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	20
Mature sequence(if miRNA)	1 - GUCUGUUGUGAUUGGAGGAC - 20
Stem-loop(if miRNA)	--CA       AGAA   A  --  UGACUUAUCGAGAAAUAUAA     UCCAAUC    UUC GA  UA                    C     |||||||    ||| ||  ||                    U     AGGUUAG    UGU UG  UG                    A CAGG       ----   -  UC  AUUUACGUUUAAGUUAUUCA
Stem-loop sequence	CAUCCAAUCAGAAUUCAGAUAUGACUUAUCGAGAAAUAUAACUAACUUAUUGAAUUUGCAUUUAGUCUGUUGUGAUUGGAGGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006594738.2	ncRNA:20   CAGGAGGUUAGUGUUGUCUG   1   *||=||||=||||||||||| targets:591   UUCUUCCAGUCACAACAGAC   610 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100779229 (LOC100779229), mRNA	uncharacterized LOC100779229(LOC100779229)	coding protein	psRNATarget
XM_014764912.1	ncRNA:20   CAGGAGGUUAGUGUUGUCUG   1   *||=||||||||||||||*| targets:650   UUCUUCCAAUCACAACAGUC   669 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100789880 (LOC100789880), mRNA	uncharacterized LOC100789880(LOC100789880)	coding protein	psRNATarget
XM_003527255.3	ncRNA:20   CAGGAGGUUAGUGUUGUCUG   1   *||=||||||||||||||*| targets:686   UUCUUCCAAUCACAACAGUC   705 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100782462 (LOC100782462), mRNA	uncharacterized LOC100782462(LOC100782462)	coding protein	psRNATarget
XM_003524215.3	ncRNA:20   CAGGAGGUUAGUGUUGUCUG   1   *|||||*||||*|||||||| targets:257   CUCCUCAAAUCCCAACAGAC   276 Target Full Sequence	2.5	PREDICTED: Glycine max BTB/POZ domain-containing protein DOT3-like (LOC100799397), transcript variant X2, mRNA	BTB/POZ domain-containing protein DOT3-like(LOC100799397)	coding protein	psRNATarget
XM_006580211.2	ncRNA:20   CAGGAGGUUAGUGUUGUCUG   1   *|||||*||||*|||||||| targets:256   CUCCUCAAAUCCCAACAGAC   275 Target Full Sequence	2.5	PREDICTED: Glycine max BTB/POZ domain-containing protein DOT3-like (LOC100799397), transcript variant X1, mRNA	BTB/POZ domain-containing protein DOT3-like(LOC100799397)	coding protein	psRNATarget