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BaseInfo

ncRNA ID	novel_gma_miR3403
Species	Glycine max
Class	miRNA
Genome position	Chr1:6401480-6401704 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451674
Length	21
Mature sequence(if miRNA)	1 - CAACCACUUCAAAGAACACCC - 21
Stem-loop(if miRNA)	--      C       U       A  A            A       U                                A        C     UG U         ACC   GUGUUC UUGAAGU GUUGAGG GU UGAGAAGGAAUC GUUGUUG AGUUUCUAUGAAGCAAAUAUGGUAUGAUGUAA GGAAACAU AAAAC  A GUUAGUUGA   C   |||||| ||||||| ||||||| || |||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| |||||  | |||||||||   U   CACAAG AACUUCA CAACUCC CA ACUCUUCCUUAG CAACAAC UCAAAGGUACUUUGUUUAUACCAUACUACAUU CCUUUGUA UUUUG  U CAAUCAGCU   A CC      A       C       C  C            C       C                                C        U     GU U         AAU
Stem-loop sequence	GUGUUCCUUGAAGUUGUUGAGGAGUAUGAGAAGGAAUCAGUUGUUGUAGUUUCUAUGAAGCAAAUAUGGUAUGAUGUAAAGGAAACAUCAAAACUGAUGUUAGUUGAACCCUAUAAUCGACUAACUUUGGUUUUUAUGUUUCCCUUACAUCAUACCAUAUUUGUUUCAUGGAAACUCCAACAACCGAUUCCUUCUCACACCCCUCAACCACUUCAAAGAACACCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT093807.1	ncRNA:21   CCCACAAGAAACUUCACCAAC   1   *||||||=||||||||||*|| targets:611   UGGUGUUUUUUGAAGUGGCUG   631 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-14E2 unknown mRNA	NA	coding protein	psRNATarget
BT098238.1	ncRNA:21   CCCACAAGAAACUUCACCAAC   1   ***|||||||||||||*|||| targets:728   CAUUGUUCUUUGAAGUAGUUG   748 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-26H17 unknown mRNA	NA	coding protein	psRNATarget
XM_014771079.1	ncRNA:21   CCCACAAGAAACUUCACCAAC   1   **||||*|||||||*|||||| targets:1254   AAGUGUACUUUGAAUUGGUUG   1274 Target Full Sequence	2.5	PREDICTED: Glycine max cell division cycle protein 27 homolog B-like (LOC100802544), transcript variant X2, mRNA	cell division cycle protein 27 homolog B-like(LOC100802544)	coding protein	psRNATarget
XM_003552587.3	ncRNA:21   CCCACAAGAAACUUCACCAAC   1   **||||*|||||||*|||||| targets:1522   AAGUGUACUUUGAAUUGGUUG   1542 Target Full Sequence	2.5	PREDICTED: Glycine max cell division cycle protein 27 homolog B-like (LOC100802544), transcript variant X1, mRNA	cell division cycle protein 27 homolog B-like(LOC100802544)	coding protein	psRNATarget