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BaseInfo

ncRNA ID	novel_gma_miR3397
Species	Glycine max
Class	miRNA
Genome position	Chr12:8831267-8831378 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451673
Length	20
Mature sequence(if miRNA)	1 - UCUGCUGUGGUACUGUUUAC - 20
Stem-loop(if miRNA)	--U       G  G      C     AAUC   A   AAGC     U    --C    CA    AGCAGUA CA CAGCAG UUAUA    UGA UUC    AAUUA CAGU   ACAG  A    ||||||| || |||||| |||||    ||| |||    ||||| ||||   ||||    UUGUCAU GU GUCGUC AAUAU    ACU GAG    UUGAU GUUA   UGUC  C CAU       G  -      U     --AU   -   -AAA     -    UAU    UG
Stem-loop sequence	UAGCAGUAGCAGCAGCAGCUUAUAAAUCUGAAUUCAAGCAAUUAUCAGUCACAGCAACGUCUGUUAUAUUGUAGUUAAAGAGUCAUAUAUAAUCUGCUGUGGUACUGUUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT094662.1	ncRNA:20   CAUUUGUCAUGGUGUCGUCU   1   |||||||||||||||||||| targets:129   GUAAACAGUACCACAGCAGA   148 Target Full Sequence	0.0	Soybean clone JCVI-FLGm-5N16 unknown mRNA	NA	coding protein	psRNATarget
BT096726.1	ncRNA:20   CAUUUGUCAUGGUGUCGUCU   1   *|||=|||||||||||*||| targets:277   CUAAGCAGUACCACAGAAGA   296 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-15P19 unknown mRNA	NA	coding protein	psRNATarget
NM_001253056.1	ncRNA:20   CAUUUGUCAUGGUGUCGUCU   1   *|||=|||||||||||*||| targets:277   CUAAGCAGUACCACAGAAGA   296 Target Full Sequence	2.5	Glycine max squamosa promoter-binding protein 1-like (LOC100789055), mRNA	squamosa promoter-binding protein 1-like(LOC100789055)	coding protein	psRNATarget
BT092024.1	ncRNA:20   CAUUUGUCAUGGUGUCGUCU   1   *|||=|||||||||||*||| targets:271   CUAAGCAGUACCACAGAAGA   290 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-9K12 unknown mRNA	NA	coding protein	psRNATarget
NM_001249380.1	ncRNA:20   CAUUUGUCAUGGUGUCGUCU   1   *|||=|||||||||||*||| targets:271   CUAAGCAGUACCACAGAAGA   290 Target Full Sequence	2.5	Glycine max uncharacterized LOC100527199 (LOC100527199), mRNA	uncharacterized LOC100527199(LOC100527199)	coding protein	psRNATarget
XM_006595655.2	ncRNA:20   CAUUUGUCAUGGUGUCGUCU   1   **||||||||*||||||||| targets:478   CAAAACAGUAGCACAGCAGA   497 Target Full Sequence	2.5	PREDICTED: Glycine max LOB domain-containing protein 24-like (LOC100790640), mRNA	LOB domain-containing protein 24-like(LOC100790640)	coding protein	psRNATarget