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BaseInfo

ncRNA ID novel_gma_miR3395
Species Glycine max
Class miRNA
Genome position Chr9:48550205-48550287 [+]
Reference genome Glycine_max_v2.0
Source SRR1451673
Length 19
Mature sequence(if miRNA) 65 - UGGGUUGAGAAAGGGAAAG - 83
Stem-loop(if miRNA) --       GUG   G    ----     -CU       UCCAU
  UUCUUUU   CAA UCAA    GCUUG   CCGAAUA     U
  |||||||   ||| ||||    |||||   |||||||
  AAGGGAA   GUU GGUU    UGAAC   GGUUUAU     G
GA       AGA   G    UUAA     UAU       UUUUU
Stem-loop sequence UUCUUUUGUGCAAGUCAAGCUUGCUCCGAAUAUCCAUUGUUUUUUAUUUGGUAUCAAGUAAUUUUGGGUUGAGAAAGGGAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573219.2
ncRNA:19   GAAAGGGAAAGAGUUGGGU   1
  **||||||||||||||||*
targets:3233   ACUUCCCUUUCUCAACCCC   3251

3.0 PREDICTED: Glycine max phosphoenolpyruvate carboxylase 4-like (LOC100785020), mRNA phosphoenolpyruvate carboxylase 4-like(LOC100785020) coding protein psRNATarget