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BaseInfo

ncRNA ID	novel_gma_miR3389
Species	Glycine max
Class	miRNA
Genome position	Chr10:43681003-43681114 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451673
Length	21
Mature sequence(if miRNA)	92 - UUGUUCUUUCUUUCUUGAUAC - 112
Stem-loop(if miRNA)	--AA              GU    U    -------       - UUUUGUGUUUCCUCUA     CAAGGAAGGAAGAG  CAGG UUCU       UGCUCAG C                U     ||||||||||||||  |||| ||||       ||||||| |     GUUCUUUCUUUCUU  GUUC AGGA       ACGAGUU G                U CAUA              --    U    CUUAAAU       U UAUCUUCCUAUUACCC
Stem-loop sequence	AACAAGGAAGGAAGAGGUCAGGUUUCUUGCUCAGCUUUUGUGUUUCCUCUAUUCCCAUUAUCCUUCUAUGUUUGAGCAUAAAUUCAGGAUCUUGUUCUUUCUUUCUUGAUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003547944.3	ncRNA:21   CAUAGUUCUUUCUUUCUUGUU   1   |||*=|||||||||||||||| targets:2107   GUAGUAAGAAAGAAAGAACAA   2127 Target Full Sequence	2.0	PREDICTED: Glycine max protein indeterminate-domain 2-like (LOC100783947), mRNA	protein indeterminate-domain 2-like(LOC100783947)	coding protein	psRNATarget
XM_003535583.3	ncRNA:21   CAUAGUUCUUUCUUUCUUGUU   1   **||*=||||||||||||||| targets:134   CAAUAGAGAAAGAAAGAACAA   154 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100815684 (LOC100815684), mRNA	uncharacterized LOC100815684(LOC100815684)	coding protein	psRNATarget
XM_003556424.3	ncRNA:21   CAUAGUUCUUUCUUUCUUGUU   1   |*|||||*||||||=|||||| targets:871   GAAUCAAUAAAGAAGGAACAA   891 Target Full Sequence	2.5	PREDICTED: Glycine max E3 ubiquitin protein ligase DRIP2-like (LOC100808982), mRNA	E3 ubiquitin protein ligase DRIP2-like(LOC100808982)	coding protein	psRNATarget
XM_003540341.3	ncRNA:21   CAUAGUUCUUUCUUUCUUGUU   1   |*|||||*||||=|||||||| targets:789   GAAUCAAAAAAGGAAGAACAA   809 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor TCP4-like (LOC100796390), mRNA	transcription factor TCP4-like(LOC100796390)	coding protein	psRNATarget
AK244311.1	ncRNA:21   CAUAGUUCUUUCUUUCUUGUU   1   **|*|||||=||||||||||| targets:1019   CAAGCAAGAGAGAAAGAACAA   1039 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-02-K16	NA	coding protein	psRNATarget
XM_003539880.3	ncRNA:21   CAUAGUUCUUUCUUUCUUGUU   1   **|*|||||=||||||||||| targets:1314   CAAGCAAGAGAGAAAGAACAA   1334 Target Full Sequence	2.5	PREDICTED: Glycine max protein IQ-DOMAIN 14 (LOC100813620), mRNA	protein IQ-DOMAIN 14(LOC100813620)	coding protein	psRNATarget
NM_001251525.2	ncRNA:21   CAUAGUUCUUUCUUUCUUGUU   1   *|**||||||||||||||||= targets:358   CUCACAAGAAAGAAAGAACAG   378 Target Full Sequence	3.0	Glycine max uncharacterized LOC100527084 (LOC100527084), mRNA	uncharacterized LOC100527084(LOC100527084)	coding protein	psRNATarget
BT091898.1	ncRNA:21   CAUAGUUCUUUCUUUCUUGUU   1   *|**||||||||||||||||= targets:360   CUCACAAGAAAGAAAGAACAG   380 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-9G9 unknown mRNA	NA	coding protein	psRNATarget