Search result

BaseInfo

ncRNA ID novel_gma_miR3378
Species Glycine max
Class miRNA
Genome position Chr12:11257378-11257424 [+]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 20
Mature sequence(if miRNA) 28 - AACUAUUUCGGAUUGUUCAG - 47
Stem-loop(if miRNA) -- C    - G        CGAAU
  G ACAG C GAAGUAGU     U
  | |||| | ||||||||
  C UGUU G CUUUAUCA     A
GA U    A G        AUAGA
Stem-loop sequence GCACAGCGGAAGUAGUCGAAUUAAGAUAACUAUUUCGGAUUGUUCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003533187.3
ncRNA:20   GACUUGUUAGGCUUUAUCAA   1
  ||*|||||||*|||||||||
targets:1658   CUAAACAAUCAGAAAUAGUU   1677

2.5 PREDICTED: Glycine max molybdenum cofactor sulfurase-like (LOC100794367), mRNA molybdenum cofactor sulfurase-like(LOC100794367) coding protein psRNATarget
XM_003525483.3
ncRNA:20   GACUUGUUAGGCUUUAUCAA   1
  =||||*||||||||||*|||
targets:1281   UUGAAAAAUCCGAAAUUGUU   1300

2.5 PREDICTED: Glycine max transcription factor GTE10-like (LOC100787770), mRNA transcription factor GTE10-like(LOC100787770) coding protein psRNATarget