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BaseInfo

ncRNA ID	novel_gma_miR3375
Species	Glycine max
Class	miRNA
Genome position	Chr1:3275882-3275975 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294485
Length	24
Mature sequence(if miRNA)	1 - AAUCAGAACAUGACACGUGGCAGU - 24
Stem-loop(if miRNA)	--          G  A         AAU     AUCUAUGAAAAA   AAU   U   UGUCAUGUGU AU UUCUGAUUG   GUCGA            UGA   GCA U   |||||||||| || |||||||||   |||||            |||   |||   ACGGUGCACA UA AAGACUAAC   CAGUU            ACU   UGU G UG          G  C         ---     ------------   -GU   U
Stem-loop sequence	UGUCAUGUGUGAUAUUCUGAUUGAAUGUCGAAUCUAUGAAAAAUGAAAUGCAUUGUUGUUGUCAUUGACCAAUCAGAACAUGACACGUGGCAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB170905.1	ncRNA:24   UGACGGUGCACAGUACAAGACUAA   1   ||||=|||||||||||||||*||| targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39 Target Full Sequence	1.5	Sequence 8569 from Patent EP2559767	NA	coding protein	psRNATarget
HI410444.1	ncRNA:24   UGACGGUGCACAGUACAAGACUAA   1   ||||=|||||||||||||||*||| targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39 Target Full Sequence	1.5	Sequence 8569 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242574.1	ncRNA:24   UGACGGUGCACAGUACAAGACUAA   1   ||||=|||||||||||||||*||| targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39 Target Full Sequence	1.5	Sequence 8569 from Patent EP2985353	NA	coding protein	psRNATarget
HI410445.1	ncRNA:24   UGACGGUGCACAGUACAAGACUAA   1   ||||=|||||||||||||||*||| targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100 Target Full Sequence	1.5	Sequence 8570 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242575.1	ncRNA:24   UGACGGUGCACAGUACAAGACUAA   1   ||||=|||||||||||||||*||| targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100 Target Full Sequence	1.5	Sequence 8570 from Patent EP2985353	NA	coding protein	psRNATarget
JB170906.1	ncRNA:24   UGACGGUGCACAGUACAAGACUAA   1   ||||=|||||||||||||||*||| targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100 Target Full Sequence	1.5	Sequence 8570 from Patent EP2559767	NA	coding protein	psRNATarget
XM_003518407.3	ncRNA:24   UGACGGUGCACAGUACAAGACUAA   1   ||||=|||||||||*||||||||| targets:1635   ACUGUCACGUGUCACGUUCUGAUU   1658 Target Full Sequence	1.5	PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100803577), mRNA	UPF0481 protein At3g47200-like(LOC100803577)	coding protein	psRNATarget
JB170936.1	ncRNA:24   UGACGGUGCACAGUACAAGACUAA   1   |||*=|||||||||||||=||||* targets:106   ACUUUCACGUGUCAUGUUUUGAUG   129 Target Full Sequence	2.5	Sequence 8600 from Patent EP2559767	NA	coding protein	psRNATarget
HI410475.1	ncRNA:24   UGACGGUGCACAGUACAAGACUAA   1   |||*=|||||||||||||=||||* targets:106   ACUUUCACGUGUCAUGUUUUGAUG   129 Target Full Sequence	2.5	Sequence 8600 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242605.1	ncRNA:24   UGACGGUGCACAGUACAAGACUAA   1   |||*=|||||||||||||=||||* targets:106   ACUUUCACGUGUCAUGUUUUGAUG   129 Target Full Sequence	2.5	Sequence 8600 from Patent EP2985353	NA	coding protein	psRNATarget
XM_006573624.2	ncRNA:24   UGACGGUGCACAGUACAAGACUAA   1   |||*=|||||||||||||=||||* targets:1515   ACUUUCACGUGUCAUGUUUUGAUG   1538 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor bHLH18-like (LOC100816551), transcript variant X2, mRNA	transcription factor bHLH18-like(LOC100816551)	coding protein	psRNATarget
XM_006573623.2	ncRNA:24   UGACGGUGCACAGUACAAGACUAA   1   |||*=|||||||||||||=||||* targets:1527   ACUUUCACGUGUCAUGUUUUGAUG   1550 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor bHLH18-like (LOC100816551), transcript variant X1, mRNA	transcription factor bHLH18-like(LOC100816551)	coding protein	psRNATarget